Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan3g1089 ATGAAGCACACTTCCTCTGAGGCAGTTTCATCTATTTCTTCTGCACCCGACCAATCGCACGCTTCCTCATCATCATCATCATCATCATCGCTCTCATCGGACCACAAGTCCGCCCTAGTTCTCTCCACCTCGAACTCTTCCTCCTCCGCCGTCGCGGCTGAGGACCTAACCATATCGTCGAGAGACGGAGGAGGAGGCGCCGCCGCGCTGGAAACCGTCGCTGTCGATCGTCGCGGCGAGTACTCTGCCGTGTGTAGATGGACGGTGCAGAATTTCCCGAGGATAAAAGCTAGGGCACTGTGGAGCAAATATTTTGAGGTTGGCGGTTATGATTGTCGGCTCCTTATATACCCTAAGGGTGATTCGCAAGCTCTTCCTGGTTATATCTCAATCTATCTTCAAATCATGGACCCTCGCGGAACCTCGTCGTTGAAATGGGACTGTTTCGCGAGCTATCGTCTCGCAATCGTTAACGTCGCCGACGATTCCAAAACGATTCACCGCGATTCCTGGCATCGATTTTCTAGTAAGAAGAAATCGCACGGCTGGTGCGATTTCACACCGTCTTCTACTGTTTTTGATCCGAAATTAGGTTATATGTTTAATAACGATTCGGTTTTAATAACTGCTGATATTCTTATTCTCAATGAGTCTGTTAATTTCACTCGTGATAATAATGAGTTGCAGTCGTCATCGTCGTCAACCACTTTCTCCGTGGTTGCGAATCCTGTGTCTGATGTTTTGAGTGGGAAGTTTACTTGGAAAGTGCATAATTTCAGTTTATTTAAGGATATGATCAGATCACAGAAGATAATGAGTCCTGTTTTTCCTGCTGGAGAGTGTAATTTGAGGATTAGTGTGTACCAGAGTTCAGTGAATGGGATTGAGTATCTTTCAATGTGTTTGGAAAGTAAGGATACTGATAAGACTGTGACGTTGTCTGATAGGAGTTGCTGGTGCTTATTTAGAATGTCTGTGTTGAATCAGAAGCCTGGTACGAATCACATGCATAGGGATTCCTATGGGCGGTTTGCTGCTGATAATAAGAGTGGTGACAATACCAGCTTGGGCTGGAATGATTATATGAAGATGTCAGATTTTATTGGAACTGATTCGGGGTTTATAGTGGATGATACTGCAATTTTTAGCACGTCGTTTCATGTGATCAAGGAGTTTTGTAGCTTCTCTAAGAATGGGACTGTAATTGCAGGGAGAAGTGGGGGTGGGGCAAGGAAGTCAGATGGCCACATCGGAAAGTTCACTTGGAGGATTGAGAATTTTACAAGGTTGAAGGATTTACTGAAGAAGAGGAAGATTACAGGTCTTTGCATCAAGAGCAGGAGGTTTCAGATTGGTAATCGGGATTGTCGGCTTATTGTTTATCCCAGAGGGCAGTCTCAGCCACCATGCCACCTTTCAGTTTTTCTTGAAGTTACGGATTCAAGAAATACTTCCAGTGATTGGAGTTGTTTTGTTAGTCATCGTTTATCAGTTGTGAACCAGAGGGTGGAGGATAAGTCTGTCACCAAGGAATCTCAGAACCGCTACTCCAAGGCTGCAAAAGATTGGGGCTGGCGTGAATTCGTGACACTTACAAGTCTCTTCGATCAAGACTCAGGTTTTCTTGTCCAGGATACTGTCATATTCTCAGCTGAAGTTCTTATATTGAAAGAGACATCAATAATGCAGGATTTTACTGGTCAAGATTCCGAGTTAAGCAGCAATGGTTCCCTTGATAGTGGTGAGAAAAGAAGTTCCTTTACATGGAAAGTGGAGAACTTCCTGTCTTTTAAGGAAATAATGGAGACTCGAAAAATCTTCAGCAAATTCTTTCAGGCTGGTGGATGTGAACTTCGGATTGGTGTGTATGAGTCATTTGACACCATATGTATTTATTTGGAGAGTGACCAGGCTGTTGGCAGTGATCCTGATAAAAACTTCTGGGTCAAATATAGGATGGCTATTGTGAATCAGAAAAACCCGGCCAAGACAGTATGGAAAGAATCTTCTATCTGTACGAAGACGTGGAATAATTCTGTTTTGCAATTCATGAAGGTGTCTGATATGTTAGAAGCAGATGCTGGGTTTCTGGTCCGTGACACAGTTGTTTTTGTATGTGAAATATTGGACTGCTGTCCTTGGTTTGAGTTTTCAGACTTAGAGGTTTTAGCTTCAGAGGATGATCAGGATGCATTGACCACTGATCCTGATGAGCTCGTTGACTCTGAAGAAAGTGAAGGAATAAGTGGAGATGAGGAAGATATTTTCAGAAATCTTCTTTCCAGAGCTGGATTTCATCTAACTTATGGAGATAATCCTTCACAGCCACAGGTTACTCTGAGAGAGAAACTTTTGATGGATGCTGGTGCAATTGCTGGGTTTCTGACTGGACTTCGGGTTTATCTTGATGATCCTGCCAAAGTAAAGCGTTTGCTTCTTCCTACGAAGCTCTCTGGTACTTGTGATGGAAAGAAGGCCACCAAGACTGACGAGTCTTCCCCAAGTTTGATGAATTTGCTGATGGGAGTAAAAGTCTTGCAGCAAGCAATTATTGATTTACTCTTGGATATAATGGTTGAGTGCTGCCAAACTTCCGAAGGGGGTCCTGCTGCTGATTCTGTTGATGCATGCTCCAAACCTTCTCCAGACAGCAGTGGAGCTGCTAGTCCACTCAAATGTGATAGAGAAAATGGAGCAACAGTGTCTTCTCAATTTCCCATTAAAGAGAGATTGGATAATGTTGTTGAAGATATCAGTAGTACATCTGCGGTACAGAGCTCTGATTTAAATGCTAATGGTATTCAGGAAAAAGCTCTTCCTGGTCAGACTATTTTTCCACCAGAAACATCTGCCACTGGTTCAGAAAATATGCCCTTTAGGTCAAAGACAAAGTGGCCAGAGCAGTCTGAGGAGCTCTTAGGTTTGATTGTGAACTCGCTAAGAGCTTTGGATGGGTCTGTTCCACAAGGCTGTCCAGAGCCAAGACGGCGACCTCAGTCTGCACAGAAAATTTGTCTTGTATTGGACAAGGCTCCTAAGCATTTGCAAGCAGACCTTGTTGCTCTGGTACCCAAATTGGTTGAGCATTCTGAACACCCACTGGCGGCATGTGCACTTCTTGAGCGACTTCAAAAGTCTGATGCAGAACCTACACTACGAATACCTGTTTTTGGGGCTCTTAGTCAACTGGAGTGTGGCAGTGAAGTGTGGGAGCGCATTCTGTTTCAGTCATTTGAGCTTTTGGAAGACTCAAATGATGAACCCCTTGCTGCAACAATAGATTTTATATTCAAAGCGGCATCTCAATGTCAACACCTACCTGAAGCAGTTAGGTCTGTTCGTGCCAGGCTGAAGAATCTAGGTCTTGAGGTGTCACCTAGTGTCCTCGATTTTTTGAGTAAGACTCTAAATAGTTGGGGTGATGCTGCTGAAACCATACTTAGGGACATTGATTGTGACAATGATTATGGTGACAGTTGCTCAGCTGTGCCATGTCGAGTTTTATTATGTGGCGAACATAGCATTGCTCCTCCTGGGCTGCATGTGGTTGATGAGCAGGCATTCCGTGCTTGTCGTCATTTTTCTGATATTTATATAATGTTGGAGATGTTATCTATTCCTTGTCTTGCAATTGAAGCATCTCAAACATTTGAGAGAGCTGTAGCTCGGGGTGCAATACATGCTCAGTCTGTAGCGCTAGTATTGGAAAGTCGCCTTTCCCAAAGTTTCAATGATAATGCTAGATATGTTTCTGAAAATTTTCAACATTCAGATGATATAGTGGAGGGAGATACTGGTGAGCAAATGGGAGTTCAAAGGGATGATTTTACTTTAGTTCTTGGACTTGCTGAAACTTTGGCCCTCTCCAGAGACCGATGTGTGAAAGAATTTGTGAAGTTGCTCTACACGATATTGTTTAGGTGGTATGCCGATGAATCTTATCGAGGTAAGATGCTGAAGAGGCTTGTTGACCGTGCCACCAGCTCTACAGATAATGATCGTGAAGTAGATTTTGATTTGGATATCTTGGTCAATTTGGTCTGTGAGGAACAGGAGATTATTAGGCCTGTTTTGAGCATGATGCGTGAAGTTGCTGAACTTGCAAATGTTGATCGGGCTGCTCTATGGCACCAGCTATGTGCTAGTGAAGATGAAATTATTCGCATTCGTGAAGAAAGCAAAACAGAGATTTCCAATATGGCTAGGGAAAACGCGACCATATCACAGAAGCTAAGTGAATCTGAGGCCACAAACATTCGTCTCAAGGCTGAAATGAAGGCCGAGATGGATCGGTTTACTCGGGAAAAGAAGGAGCTATCAGAACATGTTCAAGAAGTTGAGAGTCAGCTTGAATGGCTTCGCTCAGAGCGAGATGATGAAATAAAAAAGCTGTATGCAGACAAGAAAGTTCTTCAGGACCGTTTACATGATGCTGACACACAACTTTCTCAATTGAAGTCTCGGAAACGTGACGAATTAAAGAAAGTAGTAAAGGAGAAAAATGCACTTGCTGAAAGACTGAAGAACGCCGAAGCCGCTCGTAAGAGATTTGATGAAGAATTGAAAAGATTTGCAACAGAGAATGTCACTCGGGAAGAAATCCGACAATCACTTGAGGATGAAGTTCGTAGATTGACTCAAACAGTTGGGCAAACTGAGGGAGAAAAGCGGGAAAAGGAGGAGCAAGTTGCTAGGTGTGAAGCATATATTGATGGCATGGAATCAAAGTTGCAGGCCTGCCAGCAATATATTCACACACTTGAGGCTTCACTCCAGGAGGAAATGTCACGACATGCCCCTCTATATGGTGCTGGTCTGGAAGCTCTATCAATGAAAGAATTGGAAACTCTATCACGTATTCACGAAGAAGGGCTGAGGCAGATCCATGCTCTTCAACACCGTAAAGGTAGTCCTGCTGGGAGTCCCCTTGTGAGTCCCCATACTCTCTCACACAATCATGGATTATATCCTCCTCCGTCGCCTGCAATGGCCATGGGACTGCCTCCCTCAATCATCCCAAATGGGGTAGGGATCCATAGCAACGGGCACGTGAATGGTGCAGTTGGACCCTGGTTTAACCACTCTTAA 5088 0.4393 MKHTSSEAVSSISSAPDQSHASSSSSSSSSLSSDHKSALVLSTSNSSSSAVAAEDLTISSRDGGGGAAALETVAVDRRGEYSAVCRWTVQNFPRIKARALWSKYFEVGGYDCRLLIYPKGDSQALPGYISIYLQIMDPRGTSSLKWDCFASYRLAIVNVADDSKTIHRDSWHRFSSKKKSHGWCDFTPSSTVFDPKLGYMFNNDSVLITADILILNESVNFTRDNNELQSSSSSTTFSVVANPVSDVLSGKFTWKVHNFSLFKDMIRSQKIMSPVFPAGECNLRISVYQSSVNGIEYLSMCLESKDTDKTVTLSDRSCWCLFRMSVLNQKPGTNHMHRDSYGRFAADNKSGDNTSLGWNDYMKMSDFIGTDSGFIVDDTAIFSTSFHVIKEFCSFSKNGTVIAGRSGGGARKSDGHIGKFTWRIENFTRLKDLLKKRKITGLCIKSRRFQIGNRDCRLIVYPRGQSQPPCHLSVFLEVTDSRNTSSDWSCFVSHRLSVVNQRVEDKSVTKESQNRYSKAAKDWGWREFVTLTSLFDQDSGFLVQDTVIFSAEVLILKETSIMQDFTGQDSELSSNGSLDSGEKRSSFTWKVENFLSFKEIMETRKIFSKFFQAGGCELRIGVYESFDTICIYLESDQAVGSDPDKNFWVKYRMAIVNQKNPAKTVWKESSICTKTWNNSVLQFMKVSDMLEADAGFLVRDTVVFVCEILDCCPWFEFSDLEVLASEDDQDALTTDPDELVDSEESEGISGDEEDIFRNLLSRAGFHLTYGDNPSQPQVTLREKLLMDAGAIAGFLTGLRVYLDDPAKVKRLLLPTKLSGTCDGKKATKTDESSPSLMNLLMGVKVLQQAIIDLLLDIMVECCQTSEGGPAADSVDACSKPSPDSSGAASPLKCDRENGATVSSQFPIKERLDNVVEDISSTSAVQSSDLNANGIQEKALPGQTIFPPETSATGSENMPFRSKTKWPEQSEELLGLIVNSLRALDGSVPQGCPEPRRRPQSAQKICLVLDKAPKHLQADLVALVPKLVEHSEHPLAACALLERLQKSDAEPTLRIPVFGALSQLECGSEVWERILFQSFELLEDSNDEPLAATIDFIFKAASQCQHLPEAVRSVRARLKNLGLEVSPSVLDFLSKTLNSWGDAAETILRDIDCDNDYGDSCSAVPCRVLLCGEHSIAPPGLHVVDEQAFRACRHFSDIYIMLEMLSIPCLAIEASQTFERAVARGAIHAQSVALVLESRLSQSFNDNARYVSENFQHSDDIVEGDTGEQMGVQRDDFTLVLGLAETLALSRDRCVKEFVKLLYTILFRWYADESYRGKMLKRLVDRATSSTDNDREVDFDLDILVNLVCEEQEIIRPVLSMMREVAELANVDRAALWHQLCASEDEIIRIREESKTEISNMARENATISQKLSESEATNIRLKAEMKAEMDRFTREKKELSEHVQEVESQLEWLRSERDDEIKKLYADKKVLQDRLHDADTQLSQLKSRKRDELKKVVKEKNALAERLKNAEAARKRFDEELKRFATENVTREEIRQSLEDEVRRLTQTVGQTEGEKREKEEQVARCEAYIDGMESKLQACQQYIHTLEASLQEEMSRHAPLYGAGLEALSMKELETLSRIHEEGLRQIHALQHRKGSPAGSPLVSPHTLSHNHGLYPPPSPAMAMGLPPSIIPNGVGIHSNGHVNGAVGPWFNHS* 1696
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan3g1089 1695 SUPERFAMILY TRAF domain-like 585 709 - -
Lan3g1089 1695 MobiDBLite consensus disorder prediction 945 961 - -
Lan3g1089 1695 ProSiteProfiles MATH/TRAF domain profile. 417 553 IPR002083 GO:0005515
Lan3g1089 1695 SMART math_3 589 689 IPR002083 GO:0005515
Lan3g1089 1695 SMART math_3 84 192 IPR002083 GO:0005515
Lan3g1089 1695 SMART math_3 254 367 IPR002083 GO:0005515
Lan3g1089 1695 SMART math_3 422 534 IPR002083 GO:0005515
Lan3g1089 1695 CDD MATH 418 553 IPR002083 GO:0005515
Lan3g1089 1695 CDD MATH 586 708 IPR002083 GO:0005515
Lan3g1089 1695 CDD MATH 86 212 IPR002083 GO:0005515
Lan3g1089 1695 ProSiteProfiles MATH/TRAF domain profile. 249 386 IPR002083 GO:0005515
Lan3g1089 1695 Coils Coil 1422 1527 - -
Lan3g1089 1695 Coils Coil 1535 1562 - -
Lan3g1089 1695 MobiDBLite consensus disorder prediction 867 898 - -
Lan3g1089 1695 MobiDBLite consensus disorder prediction 941 961 - -
Lan3g1089 1695 MobiDBLite consensus disorder prediction 1634 1657 - -
Lan3g1089 1695 Gene3D Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A 69 219 IPR008974 GO:0005515
Lan3g1089 1695 Gene3D Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A 573 710 IPR008974 GO:0005515
Lan3g1089 1695 Gene3D Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A 244 392 IPR008974 GO:0005515
Lan3g1089 1695 Gene3D Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A 410 562 IPR008974 GO:0005515
Lan3g1089 1695 SUPERFAMILY TRAF domain-like 81 220 - -
Lan3g1089 1695 CDD MATH 250 382 IPR002083 GO:0005515
Lan3g1089 1695 MobiDBLite consensus disorder prediction 1 32 - -
Lan3g1089 1695 Pfam MATH domain 90 214 IPR002083 GO:0005515
Lan3g1089 1695 Pfam MATH domain 449 555 IPR002083 GO:0005515
Lan3g1089 1695 Pfam MATH domain 597 704 IPR002083 GO:0005515
Lan3g1089 1695 ProSiteProfiles MATH/TRAF domain profile. 584 708 IPR002083 GO:0005515
Lan3g1089 1695 SUPERFAMILY TRAF domain-like 247 392 - -
Lan3g1089 1695 SUPERFAMILY TRAF domain-like 418 559 - -
Lan3g1089 1695 ProSiteProfiles MATH/TRAF domain profile. 82 212 IPR002083 GO:0005515
Lan3g1089 1695 PANTHER TRAF-LIKE FAMILY PROTEIN 43 1695 - -
Lan3g1089 1695 PANTHER TRAF-LIKE FAMILY PROTEIN 43 1695 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan3g1089 Lan-Chr3 23266547 23274635 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan3g1089 - - ccaj:109798115 2939.06
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan3g1089 3 23266547 23274635 Lan3g1089 3 23266547 23274635 ECH
Lan15g1041 15 19456176 19465371 Lan3g1089 3 23266547 23274635 LSH
Lan14g0814 14 14959688 14970480 Lan3g1089 3 23266547 23274635 LSH