Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan15g1041 ATGAATCACACTTCCTCTGTGGCAGTTTCATCTCTATCTTCTGCACCAGACCAATCGCATGCTTCCACATCATCATCACCTTCATCGGACCACAAGTCCGCCGTAGTTGCCTCCACCTCCGCCGCCGCGACCGAGGACCTTACAGTATCGTCGCGAGACGGAGGAAGTGGCGCCGCTGCGCAGGAAACTATCGCCCTTGAACGTCGCGGCGAGTACTCCGTCGTGTGCCGATGGACGGTGCAGAATTTCCCGAGGATAAAAGCTAGGGCACTGTGGAGCAAGTATTTTGAGGTTGGCGGTTACGATTGTCGACTTCTTATATATCCTAAGGGTGATTCACAAGCTCTTCCTGGTTATATCTCCATCTACCTTCAAATCATGGACCCTCGCGGAACGTCGTCGTCGAAATGGGACTGTTTCGCGAGCTACCGTCTCGCAATCGTTAACGTTGCCGACGATTCCAAAACGATTCACCGTGATTCCTGGCACCGATTCTCCAGTAAGAAGAAATCGCACGGTTGGTGCGATTTCACACCATCTTCTACTGTTTTTGATCCGAAATTAGGTTTTGTGTTTAATAATGATTCTGTTTTGATAACTGCTGATATTCTTATTATCAACGAGTCTGTTAATTTCACTCGTGATAACAATGAGTTGCAATCGTCGTTGTCATTGTCGTCGTCATCCACCTCCTCTGTGGTTGGGAGTCCTGTGTCTGATGTTTTGAGTGGGAAATTTACTTGGAAAGTGCATAATTTCACTTTATTTAAGGATATGATCAGAACACAGAAGATAATGAGTCCGGTTTTTCCTGCTGGGGAGTGTAATTTAAGGATCAGTGTGTACCAGAGCTCGGTGAATGGGGTTGATTATCTTTCAATGTGTTTGGAAAGTAAGGATACTGATAAGACTGTGTTATTGTCTGATAGGAGTTGCTGGTGTTTGTTTCGAATGTCTGTGTTGAACCAGAAGCCAGGTTCGAATCACATGCATAGGGATTCGTATGGGCGGTTCGCAGCTGATAATAAGAGTGGCGACAATACCAGCTTGGGGTGGAATGATTATATGAAGATGTCAGATTTTATTGGGACGGATTCAGGGTTTATAGTGGATGATACTGTGGTTTTTAGTACTTCGTTTCACGTGATCAAGGAGCTTAGTAGCTTCTCTAAGAATGGGGCTGCAATTGCAGGGAGAAATGTGGGTGGGGCAAGGAAGTCAGATGGCCATATCGGAAAGTTCACTTGGAGGATTGAGAATTTTACAAGGTTGAAGGATTTACTGAAGAAGAGGAAGATTACAGGTCTTTGCATCAAGAGCAGGAGGTTTCAGATCGGTAATCGGGATTGTCGCCTTATTGTTTATCCCAGAGGGCAGTCTCAGCCACCATGCCACCTTTCACTATTTCTTGAAGTTACGGATTCAAGAAATACTTCCAGTGACTGGAGTTGTTTTGTTAGTCATCGTTTATCAGTTGTGAACCAGAAGGTGGAGGATAAGTCTGTGACCAAGGAATCTCAGAACCGCTACTCCAAATCTGCGAAAGATTGGGGCTGGCGTGAATTCGTGACACTTACAAGTCTCTTTGATCAAGACTCAGGTTTTCTTCTCCAGGATACTGTCATATTCTCAGCTGAAGTTCTTATATTGAAAGAGACATCTATAATGCAGGATTTTACTGGTCATGATTCTGAGTTAAGCAGAAATGGTTCCCTTGATAGCTGTGAGAAAAGAAGTTCTTTTACATGGAAAGTGGAGAATTTTCTGTCTTTTAAGGAAATAATGGAGTCTAGAAAAATCTTCAGCAAGTTCTTTCAGGCTGGTGGATGTGAACTTCGGATTGGTGTATACGAGTCATTTGATACTATATGTATTTATTTGGAGAGTGACCAGGCTGTCGCTAGTGATCCCGACAAAAACTTCTGGGTCAAATATAGGATGGCTATTGTTAATCAGAAAACCCCGGCCAAGACAGTGTGGAAAGAATCTTCTATATGTACGAAGACATGGAATAATTCTGTTTTGCAATTCATGAAGGTGTCTGATATGTTAGAAGCAGATGCTGGGTGTCTGGTCCGTGATACTGTTGTATTTGTATGTGAAATATTGGATTGCTGCCCTTGGTTTGAGTTTTCAGACTTAGAGGTTTTAGCTTCAGATGATGATCAGGATGCATTGACCACTGATCCTGATGAGCTCATCGACTCTGGAGAAAGTGAAGGAATAAGTGGAGATGAGGAAGATATTTTCAGAAATCTTCTTTCCAGAGCTGGATTTCATATAACTTGTGGAGATAATCCTTCACAGCCACAGGTTACTTTGAGAGAGAAACTTTTGATGGATGCTGGTGCAATTGCTGGGTTTTTGACTGGACTTCGGGTTTATCTTGATGATCCTGCCAAAGTGAAGCGTTTGCTTCTTCCTACGAAGCTCTCTGGTACTTGGGATGGAAAGAAGGCCACCAAGACTGATGAGTCTTCCCCAAGTTTGATGAATTTGCTGATGGGAGTTAAAGTTTTGCAGCAAGCAATCATTGATTTACTCTTGGATATAATGGTTGAGTGCTGCCAACCTTCTGAAGGGGATCCTGTTGCTGATTCTATTGATGCAAGCTCAAAACCTTCTCCAGACAGTAGTGGAGCTGCTACTCCACTCAAATGTGATAGAGAAAATGGAGCAACAGTGTCTTCTCAATTTCCTGTTAACGAGAGATTGGATTCTGTTGTTGAAGATAGCAGCAGGACTTCTGCTGTACAGAGCTCTGATTTAAATGCTAATAGTATTCAGGAAAAAGCTCTTCCTGGACAGCCTATTTCTCCACCAGAAACGTCTGCCACTGGTTCAGAAAATACGCCCTTTCGGTCAAAGACAAAGTGGCCAGAACAGTCTGAGGAGCTCTTAGGTTTGATTGTGAACTCGCTAAGAGGTTTGGATGGGGCTGTTCCGCAAGGCTGTCGAGAACCAAGACGGCGACCTCAGTCTGCACAAAAAATTGCTCTTGTATTGGACAAGGCTCCCAAGCATTTGCAAGCAGACCTTGTTGCTCTAGTGCCCAAATTGGTTGAGCATTCCGAACACCCACTGGCTGCATGTGCACTTCTTGAGCGACTTCAAAAGTCTGATGCAGAACCTGCTCTACGAATGCCTGTTTTTGGGGCTCTTAGTCAGCTGGAATGTGGCAGTGAACTGTGGGAACGCATTCTGTTTCAGTCATTTGAGCTTTTGACAGACTCAAATGATGAACCCCTTGCTGCAACCATAGATTTTATATTCAAAGCAGCATCTCAATGTCAACACCTACCAGAAGCAGTTAGGTCTGTTCGTGCCAGGCTGAAGAATCTAGGTCTTGAAGTGTCACCTAGTGTCCTTGACTTTTTGAGTAAGACTATAAATAGTTGGGGTGACATTGCTGAAACCATACTTAGGGACATTGATCATGACGATGATAATGGTGACAGTTTCACGCCTCTGCCATGTGGGATTTTCTTATTTGGTGAACATGGCATTGCTCCTCCTGGTCTGCATGTGATTGATGAGCAGGCTTTCCGTGCTTGTCGCCATTTTTCTGATATTTATATACTGTTTGAGATGTTATCTATTCCTTGTCTTGCCATTGAAGCATCTCAAACATTTGAGAGAGCTGTAGCTCGAGGTGAAATAGATGCTCAGTCTGTAACGCTAGTATTGGACAGTCGCCTTTCCCAAAGATTCAATGGTAATGCCATATATGTTTCTGAAAAATTGCAGCATTCAGATAGTGTGGTGGAGGGAGATGCTGGTGAGCAATTGGGAGTTCAAAGGGATGATTTTACTTCTGTTCTTGGACTTGCTGAAACTTTGGCCCTCTCCAGAGATCCAGGTGTGAAAGCATTTGTGAAGCTTCTCTACACTATATTGTTTAGGTGGTATGCCAATGAATCTTATCGCGGGAAGATGTTGAAGAGCCTTGTTGACCATGCCACCAGCTCTACTGATAATGGCCGTGAAGTAGATTTTGACTTGGATATCTTGGTTAATTTGGTCTGTGAGGAGCAGGAGATTATTAGGCCTGTTTTGAGCATGATGCGTGAGGTTGCTGAACTTGCAAATGTTGACCGGGCTGCTCTATGGCACCAGTTATGTGCTAGTGAAGATGAAATTATCCGCATTCGTGAAGAAGGCAAAACAGAGATTTCCAATATGGCTAGGGAAAAAGCTACTATATCACAAAAGCTAAATGAGTCTGAGGCCACAAACATTCGTGTCAAGTCTGAAATGAAGGCTGGGATGGATCGGTTTACTCAGGAAAAGAAGGAGCTATCAGAAAATGTTCAAGAAGTTGAGAGTCAGCTTGAGTGGCTTCGCTCAGAGCGGGATGATGAAATAGCAAAGCTGTCTGCTGACAAGAAAGTTCTTCAGGACCGTTTACATGACGTTGACACACAACTTTCTCAATTGAAATCTCGGAAACGGGACGAATTAAAGAAAGTAGTGAAGGAGAAAAATGCACTTGCTGAAAGACTGAAGAACGCTGAAACTGCTCGTAAGAGATTTGATGAAGAGTTGAAAAGATTTGCAACAGAGAATGTTACTCGGAATGAAATCCGACAATCACTTGAAGATGAAGTTCGTAGATTAACTCAAACAGTTGGGCAAACTGAGGGAGAAAAGCGGGAAAAGGAGGAGCAAGTTGCTAGGTGTGAAGCATATATTGATGGCATGGAATCAAAGTTGCAGGCTTGTCAGCAATATATCCACACACTTGAGACCTCACTCCAGGAGGAAATGTCACGACACGCCCCTCTATATGGTGCTGGTCTGGAAGCTCTATCAATGAAAGAATTGGAAACTCTATCACGTATTCATGAAGAAGGGCTGAGGCAGATCCATGCTCTTCAACAGCGTAAAGGTGGTCATGCTGGGAGTCCTCTTGTGAGTCCCCATAATCTCCCGCACAACCATGTATTATATCCTCCTCCGTCGCCCCCAATGGCTGTGGGATTGCCTCCCTTTATCGTCCCAAATGGGGTAGGAATCCACAGCAACGGGCACGTGAATGGTGCACTTGGGCCCTGGTTTAACCACCCTTAA 5070 0.4404 MNHTSSVAVSSLSSAPDQSHASTSSSPSSDHKSAVVASTSAAATEDLTVSSRDGGSGAAAQETIALERRGEYSVVCRWTVQNFPRIKARALWSKYFEVGGYDCRLLIYPKGDSQALPGYISIYLQIMDPRGTSSSKWDCFASYRLAIVNVADDSKTIHRDSWHRFSSKKKSHGWCDFTPSSTVFDPKLGFVFNNDSVLITADILIINESVNFTRDNNELQSSLSLSSSSTSSVVGSPVSDVLSGKFTWKVHNFTLFKDMIRTQKIMSPVFPAGECNLRISVYQSSVNGVDYLSMCLESKDTDKTVLLSDRSCWCLFRMSVLNQKPGSNHMHRDSYGRFAADNKSGDNTSLGWNDYMKMSDFIGTDSGFIVDDTVVFSTSFHVIKELSSFSKNGAAIAGRNVGGARKSDGHIGKFTWRIENFTRLKDLLKKRKITGLCIKSRRFQIGNRDCRLIVYPRGQSQPPCHLSLFLEVTDSRNTSSDWSCFVSHRLSVVNQKVEDKSVTKESQNRYSKSAKDWGWREFVTLTSLFDQDSGFLLQDTVIFSAEVLILKETSIMQDFTGHDSELSRNGSLDSCEKRSSFTWKVENFLSFKEIMESRKIFSKFFQAGGCELRIGVYESFDTICIYLESDQAVASDPDKNFWVKYRMAIVNQKTPAKTVWKESSICTKTWNNSVLQFMKVSDMLEADAGCLVRDTVVFVCEILDCCPWFEFSDLEVLASDDDQDALTTDPDELIDSGESEGISGDEEDIFRNLLSRAGFHITCGDNPSQPQVTLREKLLMDAGAIAGFLTGLRVYLDDPAKVKRLLLPTKLSGTWDGKKATKTDESSPSLMNLLMGVKVLQQAIIDLLLDIMVECCQPSEGDPVADSIDASSKPSPDSSGAATPLKCDRENGATVSSQFPVNERLDSVVEDSSRTSAVQSSDLNANSIQEKALPGQPISPPETSATGSENTPFRSKTKWPEQSEELLGLIVNSLRGLDGAVPQGCREPRRRPQSAQKIALVLDKAPKHLQADLVALVPKLVEHSEHPLAACALLERLQKSDAEPALRMPVFGALSQLECGSELWERILFQSFELLTDSNDEPLAATIDFIFKAASQCQHLPEAVRSVRARLKNLGLEVSPSVLDFLSKTINSWGDIAETILRDIDHDDDNGDSFTPLPCGIFLFGEHGIAPPGLHVIDEQAFRACRHFSDIYILFEMLSIPCLAIEASQTFERAVARGEIDAQSVTLVLDSRLSQRFNGNAIYVSEKLQHSDSVVEGDAGEQLGVQRDDFTSVLGLAETLALSRDPGVKAFVKLLYTILFRWYANESYRGKMLKSLVDHATSSTDNGREVDFDLDILVNLVCEEQEIIRPVLSMMREVAELANVDRAALWHQLCASEDEIIRIREEGKTEISNMAREKATISQKLNESEATNIRVKSEMKAGMDRFTQEKKELSENVQEVESQLEWLRSERDDEIAKLSADKKVLQDRLHDVDTQLSQLKSRKRDELKKVVKEKNALAERLKNAETARKRFDEELKRFATENVTRNEIRQSLEDEVRRLTQTVGQTEGEKREKEEQVARCEAYIDGMESKLQACQQYIHTLETSLQEEMSRHAPLYGAGLEALSMKELETLSRIHEEGLRQIHALQQRKGGHAGSPLVSPHNLPHNHVLYPPPSPPMAVGLPPFIVPNGVGIHSNGHVNGALGPWFNHP* 1690
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan15g1041 1689 CDD MATH 77 203 IPR002083 GO:0005515
Lan15g1041 1689 SMART math_3 583 683 IPR002083 GO:0005515
Lan15g1041 1689 SMART math_3 75 183 IPR002083 GO:0005515
Lan15g1041 1689 SMART math_3 416 528 IPR002083 GO:0005515
Lan15g1041 1689 SMART math_3 248 361 IPR002083 GO:0005515
Lan15g1041 1689 CDD MATH 244 376 IPR002083 GO:0005515
Lan15g1041 1689 Pfam MATH domain 443 549 IPR002083 GO:0005515
Lan15g1041 1689 Pfam MATH domain 590 698 IPR002083 GO:0005515
Lan15g1041 1689 Pfam MATH domain 81 205 IPR002083 GO:0005515
Lan15g1041 1689 SUPERFAMILY TRAF domain-like 241 386 - -
Lan15g1041 1689 MobiDBLite consensus disorder prediction 1 38 - -
Lan15g1041 1689 SUPERFAMILY TRAF domain-like 579 703 - -
Lan15g1041 1689 ProSiteProfiles MATH/TRAF domain profile. 243 380 IPR002083 GO:0005515
Lan15g1041 1689 Coils Coil 1462 1521 - -
Lan15g1041 1689 SUPERFAMILY TRAF domain-like 412 553 - -
Lan15g1041 1689 MobiDBLite consensus disorder prediction 911 957 - -
Lan15g1041 1689 ProSiteProfiles MATH/TRAF domain profile. 73 203 IPR002083 GO:0005515
Lan15g1041 1689 MobiDBLite consensus disorder prediction 862 959 - -
Lan15g1041 1689 Gene3D Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A 242 394 IPR008974 GO:0005515
Lan15g1041 1689 Gene3D Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A 72 219 IPR008974 GO:0005515
Lan15g1041 1689 ProSiteProfiles MATH/TRAF domain profile. 578 702 IPR002083 GO:0005515
Lan15g1041 1689 SUPERFAMILY TRAF domain-like 72 211 - -
Lan15g1041 1689 CDD MATH 580 702 IPR002083 GO:0005515
Lan15g1041 1689 ProSiteProfiles MATH/TRAF domain profile. 411 547 IPR002083 GO:0005515
Lan15g1041 1689 Coils Coil 1416 1457 - -
Lan15g1041 1689 Pfam Fanconi anaemia protein FancD2 nuclease 1264 1348 IPR029448 GO:0006281
Lan15g1041 1689 PANTHER TRAF-LIKE FAMILY PROTEIN 39 1688 - -
Lan15g1041 1689 PANTHER TRAF-LIKE FAMILY PROTEIN 39 1688 - -
Lan15g1041 1689 Gene3D Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A 567 704 IPR008974 GO:0005515
Lan15g1041 1689 Gene3D Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A 404 556 IPR008974 GO:0005515
Lan15g1041 1689 CDD MATH 412 547 IPR002083 GO:0005515
Lan15g1041 1689 Coils Coil 1529 1556 - -
Lan15g1041 1689 Gene3D - 1449 1640 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan15g1041 Lan-Chr15 19456176 19465371 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan15g1041 - - ccaj:109798115 2878.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan15g1041 15 19456176 19465371 Lan14g0814 14 14959688 14970480 LSH
Lan15g1041 15 19456176 19465371 Lan3g1089 3 23266547 23274635 LSH