Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan3g1086 ATGGCTCCGAGTACGATTCGGAAGGCGATTGGGGCGGTGAAGGACCAAACGAGTATCGGAATTGCGAAGGTGGCGAGTAATTTGGCGCCGGAGTTGGAGGTTGCGGTGGTGAAGGCGACTAGTCACGACGATGACCCGGCGAGTGAGAAGTACGTGCGCGAGATATTGAATCTGATGTCTTACTCTCGTGGCTACGTCCACGCGTGCGTTTCGGCGGTGTCGAAGCGTTTGGCGAAGACGCGCGATTGGATTGTGGCTTTGAAGGCTCTCATGCTTGTTCATAGGTTGATGAATGAAGGACCCGTTCTGTTTCAGGAGGAGATTTTGTATGCTACTAGAAGAGGAACAAGGCTGCTTAATATGTCTGATTTTAGAGATGAGGCTCATTCGAGTTCGTGGGATCATTCTGCTTTTGTTAGAACTTATGCTATGTATTTGGATCAACGACTTGAGTTGATGTTGTTTGATAGGAAAGGTGGCAGTGTTGGTGGTGGTTCTGGTTCTGGTTCTGATTCTGCTGCTGCTGATAGGTTTGTGGGGAGAGACAATTTTAGATCTCCACCGCCGAGGGCGATTGAGTATGAGTATGGAGGTGAATTCAGAGAAGAAAGTGGTGGTGGGTATGGGAATGGGATGAGGAGAACGAGGTCGTTTGGTGATACGAGTGAGAATGTTGGAAAGGAAGATAAGAGGATTGTGAGTGTAACTCCTTTGAGGGATATGAAACCGGAGAGGATTTTCGGGAAGATGGGTCATTTGCAGAGGCTTTTGGATCGGTTCTTGGCTTGTAGGCCTACTGGGTTGGCGAAGAATAGCAGGATGATTTTGATTGCTCTGTATCCTGTTGTGAAGGAGAGCTTTCAGTTATATGGTGATATATGTGAGGCTCTTGCTGTGTTGCTCGACAAATTCTTTGATATGGAGTACACGGACTGTGTTAAGGCCTTCGATGCTTATGCCAGTTCGGCAAAGCAGATCGATGAGCTTGTTGCGTTCTTCAATTGGTGTAAGGAAATGGGTGTGGCAAGGTCTTCTGAGTATCCAGAAGTTCAGAGGATTACTAGTAAGTTGCTGGAGACACTAGAGGAGTTTGTGAAAGATAGAGCCAAGAAGCCAAAAAGTCCAGAGAGGAAAAAGCTGGAAGCTCCACCGGTGGTAAAAGAAGAGGAGGAGCCCGTACCAGATATGAATGAAATCAAGGCACTGCCTCCACCCGAGAATTACACCCCACCCTCTCCGCCCAAGCCAGAGCCAGAGCCCAAGCCACAATTTACAGAGGACTTGGTCAATCTGCGAGATGATGCAGATACTGCAGATGATCAGGGCAATAAATTTGCTTTGGCACTTTTTGCTGGTGGTGCAGCTAATAATGGAAATGGATCATGGGAGGCCTTCTCATCAAATGGACAGCCGGAAGTGACTTCGGCTTGGCAAACGCCGGCCGCAGAACCTGGGAAGGCTGATTGGGAATTGGCATTGGTAGAGACTGCTAGCAATTTATCAAAGCAGAAGGCAACACTGGGCGGCGGGTTTGATCCCTTATTGTTGACTGGAATGTATGATCAAGGAATTGTGAGGCAGCATGTGAGCACTGCCCAACTTAGTGGAGGGAGTGCAAGCAGTGTTGCATTACCAGGACCCGGAAAGACCACCACCCCTGTTTTAGCGCTCCCGGCCCCAGATGGGTCCGTGAAGGCAGTTAATCAGGATCCATTTGCAGCATCATTGAGCATTCCACCACCCTCGTACGTGCAAATGTCTGATATGGAAAAGAAGCAGCAATTGCTCGTGCAGGAGCAGCAGCTGTGGCAGCATTATGCAAGGGATGGCATGCAAGGACAAGCTAGCTTGGCCAAACTCGGTGGCCCTGGATACTATGTCGGAGGTCCCATACCGGTGATGCCTTATGGAATGCCCCCGGTCAATCCCACCGGGTATTACCATTCTCCATATTGA 1956 0.4928 MAPSTIRKAIGAVKDQTSIGIAKVASNLAPELEVAVVKATSHDDDPASEKYVREILNLMSYSRGYVHACVSAVSKRLAKTRDWIVALKALMLVHRLMNEGPVLFQEEILYATRRGTRLLNMSDFRDEAHSSSWDHSAFVRTYAMYLDQRLELMLFDRKGGSVGGGSGSGSDSAAADRFVGRDNFRSPPPRAIEYEYGGEFREESGGGYGNGMRRTRSFGDTSENVGKEDKRIVSVTPLRDMKPERIFGKMGHLQRLLDRFLACRPTGLAKNSRMILIALYPVVKESFQLYGDICEALAVLLDKFFDMEYTDCVKAFDAYASSAKQIDELVAFFNWCKEMGVARSSEYPEVQRITSKLLETLEEFVKDRAKKPKSPERKKLEAPPVVKEEEEPVPDMNEIKALPPPENYTPPSPPKPEPEPKPQFTEDLVNLRDDADTADDQGNKFALALFAGGAANNGNGSWEAFSSNGQPEVTSAWQTPAAEPGKADWELALVETASNLSKQKATLGGGFDPLLLTGMYDQGIVRQHVSTAQLSGGSASSVALPGPGKTTTPVLALPAPDGSVKAVNQDPFAASLSIPPPSYVQMSDMEKKQQLLVQEQQLWQHYARDGMQGQASLAKLGGPGYYVGGPIPVMPYGMPPVNPTGYYHSPY* 652
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan3g1086 651 MobiDBLite consensus disorder prediction 404 419 - -
Lan3g1086 651 SUPERFAMILY ENTH/VHS domain 30 151 IPR008942 -
Lan3g1086 651 ProSiteProfiles ENTH domain profile. 24 160 IPR013809 -
Lan3g1086 651 PANTHER CLATHRIN ASSEMBLY PROTEIN 5 631 IPR045192 GO:0048268|GO:0072583
Lan3g1086 651 SUPERFAMILY GAT-like domain 237 367 - -
Lan3g1086 651 Pfam ANTH domain 31 153 IPR011417 GO:0005543
Lan3g1086 651 Pfam ANTH domain 226 367 IPR011417 GO:0005543
Lan3g1086 651 Gene3D - 2 156 IPR008942 -
Lan3g1086 651 Gene3D ANTH domain 230 380 IPR014712 GO:0005545|GO:0030136|GO:0030276|GO:0048268
Lan3g1086 651 MobiDBLite consensus disorder prediction 368 396 - -
Lan3g1086 651 PANTHER - 5 631 - -
Lan3g1086 651 MobiDBLite consensus disorder prediction 368 424 - -
Lan3g1086 651 CDD ANTH_N_AP180_plant 32 152 - -
Lan3g1086 651 SMART enth_2 30 160 IPR013809 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan3g1086 Lan-Chr3 23236707 23239400 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan3g1086 - - gmx:100803282 1028.85
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan3g1086 3 23236707 23239400 Lan3g1086 3 23236707 23239400 ECH
Lan15g1035 15 19424869 19427731 Lan3g1086 3 23236707 23239400 LSH
Lan14g0810 14 14945449 14948798 Lan3g1086 3 23236707 23239400 LSH