Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan15g1035 ATGTCTACGAGTACGATTCGAAAAGCGATTGGGGCGGTTAAGGATCAAACCAGTATCGGAATAGCGAAAGTGGCGAGTAACATGGCGCCGGAGTTGGAGGTCGCGGTTGTTAAGGCCACCAGCCACGACGACGATCCGGCGAGTGAGAAGTACGTTCGCGAGATCTTGAATCTCATGTCGTCGTCGCGAGGCTACGTCCACGCGTGTGTCTCTGCGGTGTCGAAGCGTTTGGCGAAGACGCGCGATTGGATCGTGGCTCTGAAGGCTCTGATGCTTGTTCATAGGTTGATGAATGAAGGACCTTCTCTTTTTCAGGAGGAGATTTTGTATGCTACGAGAAGAGGAACTAGGCTTCTCAATATGGCTAATTTTAGAGATGAAGCTCATTCTAGTTCATGGGATCATTCTGCTTTTGTTAGAACTTATTCTATGTACCTTGATCAACGACTTGAGTTGATGTTGTTTGATAGGAAAAGTGGCAGTGTTGCTGCTGCTGGTGGTGGGAGTGGGAGTGCTGGAGGTTCTGTTTCTGGCGCGGATGATAGGTTTGGGGGGAGAGACAATTTTAGATCGCCGCCACGAGCGATTGAGTATGAGTATGGAGGTGATTTCAGAGGAGAAAGTGGTGGGTATGGGAATGGGATGAGGAGGACGAGGTCGTTTGGTGATATGAGTGAGACAGTTGGAAAGGAAGAGAAGAGGATTGTGAGTGTGACTCCTTTGAGGGATATGAAACCGGAGAGGATTTTCGGGAAGATGGGTCATTTACAGAGGCTTTTGGATCGGTTCTTGGCTTGTAGGCCAACTGGGTTGGCGAAGAACAGTAGGATGATTTTGATTGCTTTGTATCCTGTTGTGAAGGAGAGCTTTCAGTTGTATGGTGATATATGTGAGGTTCTGGCCGTGTTGCTTGACAAATTCTTTGATATGGAGTACCCTGATTGTGTTAAGGCATTTGATGCTTATGCCAGTTCTGCTAAGCAGATTGATGAGCTCGTTATGTTCTTCAATTGGTGTAAGGAAACGGGTGTAGCGAGGTCTTCAGAGTACCCAGAAATTCAGAGGATTACTAGTAAGTTGCTGGAGACGCTGGAGGAGTTTGTGAGGGATAGGGCCAAGAAGCCAAAAAGTCCAGAAAGGAAAGAGCTGGAAGCACCGCCGGTGGTAAAAGAAGAGGAGGAGCCCGTACCGGATATGAATGAAATCAAGGCACTGCCTCCACCCGAGAATTACACCCAACCCCCTCCACCCGAACCGGAGCTGAAGCCTGAGCCCAAGCCACAATTTACAGAGGACTTGGTGAATATAAGAGATGATGCAGACACTGCAGATGATCAGGGTAATAAATTCGCTTTGGCGCTCTTTGCTGGTGGAGCAGCTAACAATGGAAATGGATCATGGGAAGCTTTCCCATCAAATGGACAGCCAGAAGTGACTTCAGCATGGCAAACACCGGCAGCAGAATCTGGTAAGGCTGATTGGGAATTGGCATTGGTAGAAACTGCTAGCAATTTATCAAAGCAGAAGGCAGCTCTAGGTGGTGGATTTGATCCCTTATTGTTGACTGGAATGTATGATCAAGGAATGGTGAGGCAGCATGTGAGCTCTGCCCAACTGAGTGGAGGGAGTGCTAGCAGTGTCGCATTGCCCGGACCGGGAAAGACCACAACGCCTGTTTTAGCTCTCCCAGCCCCAGATGGAAGTGTGCAACCAGTTAATCAGGATCCATTTGCTGCATCGTTAAGCATTCCACCACCCTCATATGTGCAAATGTCTGATATGGAAAAGAAACAGCAGTTACTAGTGCAGGAGCAGCAGCTGTGGCAACATTATGCAAGGGATGGGATGCAAGGACAAGGTAGCTTGGCTAAACTTGGTGGCCCTGGATACTATGCCGGAGGTCCCATGCCAGTGATGCCTTATGGAATGCCCCCAGTCAATGGAATGGGACCACCTGCCGGGTACTACCATTCTTCATCATGA 1983 0.4876 MSTSTIRKAIGAVKDQTSIGIAKVASNMAPELEVAVVKATSHDDDPASEKYVREILNLMSSSRGYVHACVSAVSKRLAKTRDWIVALKALMLVHRLMNEGPSLFQEEILYATRRGTRLLNMANFRDEAHSSSWDHSAFVRTYSMYLDQRLELMLFDRKSGSVAAAGGGSGSAGGSVSGADDRFGGRDNFRSPPRAIEYEYGGDFRGESGGYGNGMRRTRSFGDMSETVGKEEKRIVSVTPLRDMKPERIFGKMGHLQRLLDRFLACRPTGLAKNSRMILIALYPVVKESFQLYGDICEVLAVLLDKFFDMEYPDCVKAFDAYASSAKQIDELVMFFNWCKETGVARSSEYPEIQRITSKLLETLEEFVRDRAKKPKSPERKELEAPPVVKEEEEPVPDMNEIKALPPPENYTQPPPPEPELKPEPKPQFTEDLVNIRDDADTADDQGNKFALALFAGGAANNGNGSWEAFPSNGQPEVTSAWQTPAAESGKADWELALVETASNLSKQKAALGGGFDPLLLTGMYDQGMVRQHVSSAQLSGGSASSVALPGPGKTTTPVLALPAPDGSVQPVNQDPFAASLSIPPPSYVQMSDMEKKQQLLVQEQQLWQHYARDGMQGQGSLAKLGGPGYYAGGPMPVMPYGMPPVNGMGPPAGYYHSSS* 661
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan15g1035 660 MobiDBLite consensus disorder prediction 408 423 - -
Lan15g1035 660 MobiDBLite consensus disorder prediction 371 427 - -
Lan15g1035 660 ProSiteProfiles ENTH domain profile. 24 160 IPR013809 -
Lan15g1035 660 PANTHER CLATHRIN ASSEMBLY PROTEIN 5 636 IPR045192 GO:0048268|GO:0072583
Lan15g1035 660 Gene3D ANTH domain 233 382 IPR014712 GO:0005545|GO:0030136|GO:0030276|GO:0048268
Lan15g1035 660 SMART enth_2 30 160 IPR013809 -
Lan15g1035 660 MobiDBLite consensus disorder prediction 164 186 - -
Lan15g1035 660 PANTHER - 5 636 - -
Lan15g1035 660 CDD ANTH_N_AP180_plant 32 152 - -
Lan15g1035 660 Pfam ANTH domain 31 152 IPR011417 GO:0005543
Lan15g1035 660 Pfam ANTH domain 230 370 IPR011417 GO:0005543
Lan15g1035 660 SUPERFAMILY ENTH/VHS domain 30 151 IPR008942 -
Lan15g1035 660 MobiDBLite consensus disorder prediction 371 399 - -
Lan15g1035 660 Gene3D - 3 156 IPR008942 -
Lan15g1035 660 SUPERFAMILY GAT-like domain 240 370 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan15g1035 Lan-Chr15 19424869 19427731 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan15g1035 - - gmx:100803282 1021.54
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan15g1035 15 19424869 19427731 Lan14g0810 14 14945449 14948798 LSH
Lan15g1035 15 19424869 19427731 Lan3g1086 3 23236707 23239400 LSH