Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan3g0995 ATGTCATCGAAGCCGATTAATCAGTGGAAGGTTACGGAGTTGAGAGAGGAGCTGAAGAGGAGGAGGCTAACTACCACTGGTTTGAAGAATGATTTAGTCAGACGTTTGGATGATGCCCTTCGTGCTGAAAAGGAGGCTGCTGAGGCTTCCGAGAAGGAGGTGAATGGTTTGGAGAGTCATGATAATGAAGCCGAACTCAAAGATTCTGAGGACGCTGTAGCTGCTGATGAAAGGGGGAATGAGGAAAAATTTGAAGCTGTTAAGGAGAATGTTGGTTTAGTTGAACCGATTGAAAGGGAAAAGGCAGAAAAGGTTCTAGAGGGTGTGGTTGATGACAGCAGTAAGTATGACAAGCAGGACGATGTTACCATTCCAGTTGACAATAGTGCATCGGCCATGGATCAAGATGTTGAACCTACGGGGTTGCCTGCTGTTGTTGATTCTTCAAATGTGGGAGAGGAGCTAATTACTCACACTACTGTTGTGGAGACCATCACCACCACTGTTACTGAGAGTGTATTGACGGAAGTAGTAGTTGGTGGTGAAGATTCTCACAGCGCTGAAAAAAAGATTGAGGATTCAGGAACCAAGCTGGAGAATGAGGATTTAAAGGAGTACAGCACAGATAAGAATAATGACGGTTCGGGAACCAAGTTGGAGAATGAGGAGTTGAAGCTGGAGAATGAGGAGTCGAAGGCGCAGCTGGATAATGAGCACTCAAAGCCCCGACTGGAGTCTGACACAAAGCCCCAATACGACGATCTTTTGCCCAACTCCACTGTTCCTAAAAACCAGGTATCTGAGGTAAACCCTAGTTTACTAGGGTCTCAAGTAAAATCTGATTCTATTTTTAGTGATACTGTATCAATTAATAAAAAGAATGAACTAAAGGATACTATAATTACTGATAATGGCAAATTAGAACAAGATATTGTTAGGCCGGAGATGGTGGAAGAACCATCGTCCAGAAATAAACCAGTTTATGATGACTCAAATTCAATAGATGTTGGAAAGCCACATGAGAAAAAGCTATCTGTTGAAGAAAATAGCAATGTTCTTACAAGTCCAGACTTGAACAAAACCAATATTAGTGATGATGTGGGGTATCCAGAGAAGTTAAGCTTAGATAGAAGTTCTGGTGATGATTCCATGGAGGAGGATTTGCCCGAGAGCTCTAAGGTTAATTTTGATGAACTTAGAGACAAAGTGGAGAGTACTAAAGTGCCTACTGTGAAGGTGGAAAACACTACTGTTGTTGTGGGAGATGGTCAATCTGGAGGAAAAAGTGATTCCCACCAAGATATTGACTTTAGTCCAGTTGGCCTGGTCGAGAAACGAAAATTCAATGAACAAACATTAGATTGCAACAATGATCCTGCAAAAAGGCAACGTAGGTGGAATACTGATACAGTTAAAGGACCAAATCCACAAGGCACTACTCCCAGATCCACTACTACACCCAAGGATGGACCAGTTTCTCTTAAACGCAACTTCTCCAGGTCTGATTCCTTTGCAACTGACGATGCACCTAAAGAACGCATTGTTCCACCATCACAAAGGTCCCCAACTAATTCCCTCAGGATTGACCGTTTCCTCCGTCCTTTTACCCTAAAGGCAGTGCAAGAGCTTCTTGGTAAGACTGGGAATGTTAGCAGTTTCTGGATGGACCAAATAAAGACCCACTGCTATGTTACTTACTCATCCACCGAAGAAGCCATTGAGACACGGAATGCTGTGTATAATCTGCAATGGCCTCCAAATGGCGGGCGCTTCTTACTTGCTGAGTATGTTGAGCCTGAAGAAGTGAAGATGAAGTTAGAACCTCCTCCTAGTCAGGCTCCGTCCATCAGTAGTGGTCCAGCTGTTCCTCCCGCACCACCTTCACAGCCAGAGCCTTCCCCCCGTCAGCACAGGGAGCTGCCTCCACCTCCACCTACTCTCCCACCTCCCCCACCATTGTCAAAGCCGCCACCAGTAGGAATAGAACGACTTCCATCCCCACCGCCCCTTCCTGAGAAAGCTGACCTGCCTACAGTCACTCTGGATGATCTCTTCCGCAAAACCAAAGCAACTCCTCGGATCTACTATCTACCTTTGTCTGAAGAGGAAGTTGCTGCAAAACTTGCAGCACAAGGTAAAAGCTCCAGGCAGTAG 2154 0.4513 MSSKPINQWKVTELREELKRRRLTTTGLKNDLVRRLDDALRAEKEAAEASEKEVNGLESHDNEAELKDSEDAVAADERGNEEKFEAVKENVGLVEPIEREKAEKVLEGVVDDSSKYDKQDDVTIPVDNSASAMDQDVEPTGLPAVVDSSNVGEELITHTTVVETITTTVTESVLTEVVVGGEDSHSAEKKIEDSGTKLENEDLKEYSTDKNNDGSGTKLENEELKLENEESKAQLDNEHSKPRLESDTKPQYDDLLPNSTVPKNQVSEVNPSLLGSQVKSDSIFSDTVSINKKNELKDTIITDNGKLEQDIVRPEMVEEPSSRNKPVYDDSNSIDVGKPHEKKLSVEENSNVLTSPDLNKTNISDDVGYPEKLSLDRSSGDDSMEEDLPESSKVNFDELRDKVESTKVPTVKVENTTVVVGDGQSGGKSDSHQDIDFSPVGLVEKRKFNEQTLDCNNDPAKRQRRWNTDTVKGPNPQGTTPRSTTTPKDGPVSLKRNFSRSDSFATDDAPKERIVPPSQRSPTNSLRIDRFLRPFTLKAVQELLGKTGNVSSFWMDQIKTHCYVTYSSTEEAIETRNAVYNLQWPPNGGRFLLAEYVEPEEVKMKLEPPPSQAPSISSGPAVPPAPPSQPEPSPRQHRELPPPPPTLPPPPPLSKPPPVGIERLPSPPPLPEKADLPTVTLDDLFRKTKATPRIYYLPLSEEEVAAKLAAQGKSSRQ* 718
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan3g0995 717 SMART sap_9 6 40 IPR003034 -
Lan3g0995 717 MobiDBLite consensus disorder prediction 451 522 - -
Lan3g0995 717 CDD RRM_ACINU 523 607 IPR034257 -
Lan3g0995 717 MobiDBLite consensus disorder prediction 299 400 - -
Lan3g0995 717 MobiDBLite consensus disorder prediction 110 142 - -
Lan3g0995 717 MobiDBLite consensus disorder prediction 613 674 - -
Lan3g0995 717 PANTHER SAP DNA-BINDING DOMAIN-CONTAINING PROTEIN 3 714 - -
Lan3g0995 717 PANTHER SAP DNA-BINDING DOMAIN-CONTAINING PROTEIN 3 714 - -
Lan3g0995 717 MobiDBLite consensus disorder prediction 451 468 - -
Lan3g0995 717 Pfam RNSP1-SAP18 binding (RSB) motif 674 712 IPR032552 -
Lan3g0995 717 Coils Coil 219 241 - -
Lan3g0995 717 MobiDBLite consensus disorder prediction 43 84 - -
Lan3g0995 717 MobiDBLite consensus disorder prediction 370 400 - -
Lan3g0995 717 MobiDBLite consensus disorder prediction 603 681 - -
Lan3g0995 717 Pfam SAP domain 6 40 IPR003034 -
Lan3g0995 717 MobiDBLite consensus disorder prediction 182 250 - -
Lan3g0995 717 MobiDBLite consensus disorder prediction 177 280 - -
Lan3g0995 717 SUPERFAMILY SAP domain 6 43 IPR036361 -
Lan3g0995 717 ProSiteProfiles SAP motif profile. 6 40 IPR003034 -
Lan3g0995 717 MobiDBLite consensus disorder prediction 469 500 - -
Lan3g0995 717 SUPERFAMILY RNA-binding domain, RBD 517 605 IPR035979 GO:0003676
Lan3g0995 717 MobiDBLite consensus disorder prediction 348 362 - -
Lan3g0995 717 Gene3D SAP domain 1 53 IPR036361 -
Lan3g0995 717 MobiDBLite consensus disorder prediction 299 325 - -
Lan3g0995 717 MobiDBLite consensus disorder prediction 252 280 - -
Lan3g0995 717 Coils Coil 33 60 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan3g0995 Lan-Chr3 21686813 21690588 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan3g0995 K12875 - gmx:100786288 851.277
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan15g0076 15 521328 525040 Lan3g0995 3 21686813 21690588 LSH