Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan3g0852 ATGGATGATGAGTATGCTAAGCTTATAAGGAGGATGAACCCACCCAGGGTTGTGATTGACAACAATGCCTGCGAAAACGCCACTGTTATTCAGGTTGACAGTGTCAACAAACATGGAATTCTCCTGGATATTGTGCAAGTTCTTTCGGATATGAATCTCGTAATAACAAAGGCCTATATCTCCTCTGATGGGGTGTGGTTCATGGAGGTGTTTAATGTGATTGATCGTAATGGAAAGAAGATCAGAGATAAGGAAGTCATTGATTATATTCAGAGGAGACTTGAAAACAATCCAGGCTTTGCACCCTCTATGAGAGAGTCTGTTGGGGTTGTGCCTTCTGAAGAGCACACCTCAATTGAACTAACTGGTATTGACAGGCCGGGTTTATTATCGGAAGTCTGTGCTGTTCTCACAGACCTTCACTGTAATGTGGTGAATGCTGAGATATGGACACATAATAATAGGGCTGCAGCTGTAGTTCATGTGACGGATGACTCTACCGGGTTTGCTATCAACGATCCATCCCGCCTCTCTACAATAAGGGATTTGCTTTGTAATGTTCTTCGGGGAAACAGTGATCCAAAGATGGCAAGAACAACACTATCACCACATGGAGTTACAAATAGGGATAGAAGATTACATCAGATTATGTTTGCTGACAGGGACTATGAAAAAAGGGTCGAAAAAACAGGTCAAAGAGTAATTAGAGATGGAGATACAAGCTCATTCCCTCATGTAACTGCCATAGACTGTATTGAAAAAGATTACACCGTGGTTACAATGAGAGCAAAAGATCGACCGAAATTACTGTTCGATATTGTTTGCACTTTAACAGACATGGAGTACGTAGTTTATCATGGTGTTGTCCAGACAATAAGGACAGAAGCTTATCAGGAGTTTTATATTCGGCATGTTGATGGCTTTCCCATAAGCTCAGAGGCTGAGCGAGATCGTCTTATACAGTGTCTTGAAGCAGCCATCGAAAGGCGAGCATCTGAGGGGATGGAGCTGGAGTTGAGTGCCGAAGATCGAGTTGGACTACTCTCAGATATCACAAGGATATTCCGAGAAAACAGTTTATGCATCAAAAGAGCAGAAATATCAACAGAAAATGGGAAGGCAAAAGACACTTTTTACGTCACAGATGTAACCGGTAACCCAGTTGATCCCAAGATTATCGATTCAATTCGCAGACAGATTGGTGACGCGGCACTGCAGGTGAAGCATAACTCGAGTCTTTCACAGAAGGACACTCGATCGACAACAATGAGAAATCTGTTTGGTAATTTTTTCAAGGCTAGATCTTTTCAGAATTCTAAGCTGATCAGATCTTATTCTTAA 1341 0.4198 MDDEYAKLIRRMNPPRVVIDNNACENATVIQVDSVNKHGILLDIVQVLSDMNLVITKAYISSDGVWFMEVFNVIDRNGKKIRDKEVIDYIQRRLENNPGFAPSMRESVGVVPSEEHTSIELTGIDRPGLLSEVCAVLTDLHCNVVNAEIWTHNNRAAAVVHVTDDSTGFAINDPSRLSTIRDLLCNVLRGNSDPKMARTTLSPHGVTNRDRRLHQIMFADRDYEKRVEKTGQRVIRDGDTSSFPHVTAIDCIEKDYTVVTMRAKDRPKLLFDIVCTLTDMEYVVYHGVVQTIRTEAYQEFYIRHVDGFPISSEAERDRLIQCLEAAIERRASEGMELELSAEDRVGLLSDITRIFRENSLCIKRAEISTENGKAKDTFYVTDVTGNPVDPKIIDSIRRQIGDAALQVKHNSSLSQKDTRSTTMRNLFGNFFKARSFQNSKLIRSYS* 447
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan3g0852 446 Pfam ACT domain 118 165 IPR002912 -
Lan3g0852 446 Pfam ACT domain 337 398 IPR002912 -
Lan3g0852 446 Gene3D - 116 189 - -
Lan3g0852 446 Gene3D - 334 402 - -
Lan3g0852 446 SUPERFAMILY ACT-like 24 95 IPR045865 -
Lan3g0852 446 ProSiteProfiles ACT domain profile. 336 415 IPR002912 -
Lan3g0852 446 PANTHER ACT DOMAIN-CONTAINING PROTEIN ACR4-RELATED 1 438 IPR040217 -
Lan3g0852 446 SUPERFAMILY ACT-like 113 187 IPR045865 -
Lan3g0852 446 SUPERFAMILY ACT-like 332 402 IPR045865 -
Lan3g0852 446 PANTHER ACT DOMAIN-CONTAINING PROTEIN ACR6 1 438 - -
Lan3g0852 446 CDD ACT_ACR_2 117 190 - -
Lan3g0852 446 CDD ACT_ACR_3 256 330 - -
Lan3g0852 446 SUPERFAMILY ACT-like 254 328 IPR045865 -
Lan3g0852 446 ProSiteProfiles ACT domain profile. 29 113 IPR002912 -
Lan3g0852 446 ProSiteProfiles ACT domain profile. 118 208 IPR002912 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan3g0852 Lan-Chr3 16238707 16242985 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan3g0852 - - gmx:100818506 767.303
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan15g0742 15 16431106 16440367 Lan3g0852 3 16238707 16242985 LSH