Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan15g0742 ATGGCTACAGTTTGTTGGCCATATTTTGATCCTGAGTATGAGAACTTCAGCAATAGACTCAACCCTCCAAGGGTCTCTGTGGACAATGCTACTTGCCATGATTGTACACTGATCAAGGTTGATAGTGTTAACAAACCTGGAATTCTGCTGGAAGTTGTGCAAATCTTGACAGACCTTGAGTTCATAATTACCAAAGCTTACATATCTTCCGACGGAGGATGGTTTATGGATGTTTTTCATGTCACGGATCAGCAAGGAAAGAAGATAACAGATAGTAAGACCATTGACATCATTGAAAAGGCTCTAGGACCAAAGAGCCAAAGCAAAGAAGGAGCAAAGAGTTGGCCAGGCAAACGGGTTGGGGTGCATTCTGTTGGTGATCATACAGCCATTGAGCTTATTGGGAGAGACCGCCCGGGTCTCTTGTCCGAGATTTCAGCTGTCCTTGCCAGCCTTGATTTTAATGTGGTTGCAGCTGAAGTTTGGACTCATAACCTGCGTATAGCATGCGTCCTTCACATCAATGATGCTACAAATCAAGTTGTGGATGATCCAAAAAGATTATCTCTTATCGAGGAGCAGCTAAACAATATCTTGCGTGGGTGTGAAGATGGTGAAAAAGTTGCTAGGACTAGTTTCTCTGTGGGTTTCACTCATATGGACAGGCGGCTCCATCAAATGTTGTTTGCTGATCGAGATTACGAAGGTTCTGGTGTAACAACAGAAGTTGATAATCCTCCTTTTTTCAAGCCAAAAATCACAATAGAATGTTGTGAGGAAAAAGGGTATTCGGTGGTTAGTGTCCGGTGCAAAGATCGGGCAAAACTCATGTTTGACATTGTCTGCACTCTTACTGACATGCAATACGTTGTTTTCCATGCCACAATCTCATCAGATGCCCCTTATGCATCCCAGGAATACTTTATTCGGCACATGGATGGATGCACGCTTGATACTGAAGGAGAGAAAGAAAGGGTCATCAAATGCATTGAAGCTGCTATTAGAAGAAGAGTAAGCGAGGGTGTGAGCCTAGAGCTGTGTGCAAAGGATAGAGTAGGCTTGCTGTCCGAAGTAACGAGGATTCTAAGAGAAAATGGTTTGACAGTGTGTAGGGCAGGTGTATCCACCAGAGGGGAACAGGCATTGAATGTCTTCTATGTCAGGGATGCTTCAGGAAACCCGGTTGACATGAAAATGATCGAAGCACTTCGTAAAGAAATCGGTAAGACAATGATGGTGGATGTTAAGAGGGTGCCAGCCAATGCCAAAGCACCAGAAACAAAAGGATGGGCTAAAACTAGCTTCTTCTTTGGTAACTTGTTGGAGAGGTTCTTGAATTGA 1341 0.4377 MATVCWPYFDPEYENFSNRLNPPRVSVDNATCHDCTLIKVDSVNKPGILLEVVQILTDLEFIITKAYISSDGGWFMDVFHVTDQQGKKITDSKTIDIIEKALGPKSQSKEGAKSWPGKRVGVHSVGDHTAIELIGRDRPGLLSEISAVLASLDFNVVAAEVWTHNLRIACVLHINDATNQVVDDPKRLSLIEEQLNNILRGCEDGEKVARTSFSVGFTHMDRRLHQMLFADRDYEGSGVTTEVDNPPFFKPKITIECCEEKGYSVVSVRCKDRAKLMFDIVCTLTDMQYVVFHATISSDAPYASQEYFIRHMDGCTLDTEGEKERVIKCIEAAIRRRVSEGVSLELCAKDRVGLLSEVTRILRENGLTVCRAGVSTRGEQALNVFYVRDASGNPVDMKMIEALRKEIGKTMMVDVKRVPANAKAPETKGWAKTSFFFGNLLERFLN* 447
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan15g0742 446 ProSiteProfiles ACT domain profile. 37 116 IPR002912 -
Lan15g0742 446 CDD ACT_ACR_4 341 412 - -
Lan15g0742 446 SUPERFAMILY ACT-like 125 200 IPR045865 -
Lan15g0742 446 ProSiteProfiles ACT domain profile. 130 210 IPR002912 -
Lan15g0742 446 PANTHER ACT DOMAIN-CONTAINING PROTEIN ACR4-RELATED 4 445 IPR040217 -
Lan15g0742 446 ProSiteProfiles ACT domain profile. 343 420 IPR002912 -
Lan15g0742 446 SUPERFAMILY ACT-like 32 105 IPR045865 -
Lan15g0742 446 PANTHER FOUR ACT DOMAIN ACT DOMAIN PROTEIN WHICH PROTEIN 4 445 - -
Lan15g0742 446 Pfam ACT domain 37 85 IPR002912 -
Lan15g0742 446 Pfam ACT domain 130 199 IPR002912 -
Lan15g0742 446 SUPERFAMILY ACT-like 339 409 IPR045865 -
Lan15g0742 446 CDD ACT_ACR_3 263 337 - -
Lan15g0742 446 Gene3D - 338 419 - -
Lan15g0742 446 CDD ACT_ACR_1 35 105 - -
Lan15g0742 446 Gene3D - 128 210 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan15g0742 Lan-Chr15 16431106 16440367 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan15g0742 - - gmx:100789173 809.29
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan15g0742 15 16431106 16440367 Lan3g0852 3 16238707 16242985 LSH