Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan3g0799 ATGGTAGAGTGGCAACCTCTTCTTCAATCAATCTTCATAGGTCTCATCATCTCTTACCTCATCGCTAAGCTCATTTCCCTCGTCGTTTCATTCAATCACGAAAACGCCACCGTTTCATCCACCACAACCACCGATATCAAACCCAATCTACCCGATGCCGTCAAACGCGACGACGCCGTTTCAGAAATCAACCACCCTTTCGAGGCCGAATCGGTAATCGCCGAGCAAGGTAGTGTACGAAATGACAGCGATGCTGATCGTGATCAGTATGATGATGATGATGATGATGATGATGATTGGGAAGGGGTGGAAAGTACTGAGCTTGATGAAGTTTTCAGCGCCGCGACGGCTTTTGTAGCTGCCTCCGCCGCTGATCGGTTGTCACAGAAGGTTTCGAATGATATGCAGCTTCAGCTTTATGGTTTGTATAAGATTGCCACTGAAGGTCCTTGTAGTACGCCACAGCCTTCGCCTCTAAAAATGACGGCTCGAGCTAAATGGCAAGCTTGGCAGAAACTGGGTGCTATGCCTCCTGAAGATGCGATGCAGAAGTACATTGATATTGTGTCAGAGTTATATCCTTCTTGGCTTGATGGTTCATCTTTGAAGAGCAAAAGTGGTGATGGTGGTGGCTCTAGTTCAGAAGCTAAGGGACCAATGGGACCAGTATTCAGTACTTTTGTTTATGAAGAGGACTATGGAAGTGACTTGAAAATGGACGCAATTCATGGATTTGCTAGGGAAGGAGATATGGCTAATCTGCTGAAGTGTATTGAAAATGGTGTTTCAGTGAATTTGAAGGACAGTGAGGGCCGGACCCCATTACATTGGGCTGTAGATCGTGGCCACCTTGATGTCACAGAGCTGCTTGTTGGCAGGGATGCTGATGTAAATGCCAAGGATAATGATGGGCAAACTCCATTGCATTATGCTGTTACTTGTGAGAGAGAAGCAATAGCTGAGTATTTAGTGAAGCATAATGCAGATACACAGTCGAAGGATAACGATGGCTGCTCCCCACGCGACGGCTCTGAATCGAAGTGGCCGTGTCTGCAGCAGCATGTGGGAAAAGTAAACTGA 1080 0.4676 MVEWQPLLQSIFIGLIISYLIAKLISLVVSFNHENATVSSTTTTDIKPNLPDAVKRDDAVSEINHPFEAESVIAEQGSVRNDSDADRDQYDDDDDDDDDWEGVESTELDEVFSAATAFVAASAADRLSQKVSNDMQLQLYGLYKIATEGPCSTPQPSPLKMTARAKWQAWQKLGAMPPEDAMQKYIDIVSELYPSWLDGSSLKSKSGDGGGSSSEAKGPMGPVFSTFVYEEDYGSDLKMDAIHGFAREGDMANLLKCIENGVSVNLKDSEGRTPLHWAVDRGHLDVTELLVGRDADVNAKDNDGQTPLHYAVTCEREAIAEYLVKHNADTQSKDNDGCSPRDGSESKWPCLQQHVGKVN* 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan3g0799 359 SMART ANK_2a 303 332 IPR002110 GO:0005515
Lan3g0799 359 SMART ANK_2a 270 299 IPR002110 GO:0005515
Lan3g0799 359 SMART ANK_2a 237 266 IPR002110 GO:0005515
Lan3g0799 359 MobiDBLite consensus disorder prediction 330 359 - -
Lan3g0799 359 PRINTS Ankyrin repeat signature 271 286 IPR002110 GO:0005515
Lan3g0799 359 PRINTS Ankyrin repeat signature 319 333 IPR002110 GO:0005515
Lan3g0799 359 PANTHER ACYL-COA-BINDING DOMAIN-CONTAINING PROTEIN 6 1 355 - -
Lan3g0799 359 MobiDBLite consensus disorder prediction 71 101 - -
Lan3g0799 359 Pfam Ankyrin repeats (3 copies) 243 334 IPR002110 GO:0005515
Lan3g0799 359 PRINTS Acyl-coA-binding protein signature 131 149 IPR000582 GO:0000062
Lan3g0799 359 PRINTS Acyl-coA-binding protein signature 154 169 IPR000582 GO:0000062
Lan3g0799 359 PRINTS Acyl-coA-binding protein signature 175 192 IPR000582 GO:0000062
Lan3g0799 359 ProSiteProfiles Ankyrin repeat profile. 303 335 IPR002110 GO:0005515
Lan3g0799 359 SUPERFAMILY Ankyrin repeat 238 342 IPR036770 -
Lan3g0799 359 Gene3D - 102 213 IPR014352 -
Lan3g0799 359 ProSiteProfiles Ankyrin repeat profile. 270 302 IPR002110 GO:0005515
Lan3g0799 359 ProSiteProfiles Ankyrin repeat region circular profile. 270 302 - -
Lan3g0799 359 ProSiteProfiles Ankyrin repeat region circular profile. 303 335 - -
Lan3g0799 359 MobiDBLite consensus disorder prediction 87 101 - -
Lan3g0799 359 SUPERFAMILY Acyl-CoA binding protein 107 197 IPR035984 GO:0000062
Lan3g0799 359 Gene3D - 308 344 IPR036770 -
Lan3g0799 359 Gene3D - 235 307 IPR036770 -
Lan3g0799 359 PANTHER ACYL-COA-BINDING DOMAIN-CONTAINING PROTEIN 2 1 355 - -
Lan3g0799 359 Pfam Acyl CoA binding protein 109 189 IPR000582 GO:0000062
Lan3g0799 359 ProSiteProfiles Acyl-CoA-binding (ACB) domain profile. 108 198 IPR000582 GO:0000062
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan3g0799 Lan-Chr3 14886933 14891333 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan3g0799 1 353 Acyl Lipid Metabolism Gene Families AT5G53470 60.340 1.03e-140 401
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan3g0799 - - gmx:100816670 531.561
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan15g0665 15 15305479 15310218 Lan3g0799 3 14886933 14891333 LSH