Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan15g0665 ATGGGAGAATGGTTACCTCTTCTTCAATCCATCTTCATTGGTCTCATCATTTCTTACCTCATCGCTAAGCTCATTTCCTTCGTCATCTCATTCAACCACGAAAACGTCACCGTTTCATCTACAACTAACACTACTGAAATCAAACCAAACCAACTCGATGATGTGAAACAAAACGACGTCGTTTCTGAAATAAGTCAACCTTTTGAAGCGGAATCGGTTATAGCTGAGCAAGGAAGTGTGAGAAACGACACCGATGTGGATGATGATGATGGTGATCGCGATGATGATGATGATTGGGAAGGGGTAGAAAGTACTGAACTTGATGAAGCTTTCAGCGCCGCCACGGCTTTTATCGCTGCCTCCGCCGCGGACCGGTTGTCTCAGAAGGTTTCGAATGAGGTGCAGCTTCAGCTTTATGGGTTGTATAAGATTGCCACTGAAGGTCCTTGTAGCACGCCTCAACCTTCGCCTCTTAAAATGACCGCTCGTGCCAAATGGCAAGCATGGCAAAAATTGGGTGCTATGCCTCCTGAAGATGCGATGCAAAAGTACATTGATATTGTGACAGAGCTATATCCTTCTTGGCTTGATGGTTCATCTTTGAAGAGCAAAAGTGGCGATGGTGGTGGCTCTAGTTCAGATGCTAAGGGACCGATGGGACCAGTATTTAGCACTTTTGTTTATGAAGAGGATTATGGAAGTGACTTGAAAATGGATGCCATTCATGGATTTGCTAGGGAAGGAGATAAGGCAAATCTGCTGAATTGTATTGAAAATGGCGTTTCAGTGAATTTGAAGGACAGTGAGGGCCGGACCCCATTACACTGGGCTGTAGATCGGGGCCACTTCGATGTCACAGAGCTTCTAGTTGGCAGGGATGCTGAAATAAATGCTAAGGATAATGATGGACAAACTCCATTGCATTATGCTGTTATGTGTGAGAGAGAAGCAATAGCTGAGTATTTAGTGAAGCATAATGCAGACACACGTTCAAAGGATAATGATGGCAGTTCCCCGCGTGGCAGCTGCGAGTCAAACTGGCCGTGTCTGCAGCAGCATGTGGGAGAAGTAAATTGA 1077 0.454 MGEWLPLLQSIFIGLIISYLIAKLISFVISFNHENVTVSSTTNTTEIKPNQLDDVKQNDVVSEISQPFEAESVIAEQGSVRNDTDVDDDDGDRDDDDDWEGVESTELDEAFSAATAFIAASAADRLSQKVSNEVQLQLYGLYKIATEGPCSTPQPSPLKMTARAKWQAWQKLGAMPPEDAMQKYIDIVTELYPSWLDGSSLKSKSGDGGGSSSDAKGPMGPVFSTFVYEEDYGSDLKMDAIHGFAREGDKANLLNCIENGVSVNLKDSEGRTPLHWAVDRGHFDVTELLVGRDAEINAKDNDGQTPLHYAVMCEREAIAEYLVKHNADTRSKDNDGSSPRGSCESNWPCLQQHVGEVN* 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan15g0665 358 ProSiteProfiles Ankyrin repeat profile. 302 334 IPR002110 GO:0005515
Lan15g0665 358 PRINTS Ankyrin repeat signature 270 285 IPR002110 GO:0005515
Lan15g0665 358 PRINTS Ankyrin repeat signature 318 332 IPR002110 GO:0005515
Lan15g0665 358 PANTHER ACYL-COA-BINDING DOMAIN-CONTAINING PROTEIN 6 1 354 - -
Lan15g0665 358 Gene3D - 101 212 IPR014352 -
Lan15g0665 358 ProSiteProfiles Ankyrin repeat profile. 269 301 IPR002110 GO:0005515
Lan15g0665 358 ProSiteProfiles Acyl-CoA-binding (ACB) domain profile. 107 197 IPR000582 GO:0000062
Lan15g0665 358 Gene3D - 307 341 IPR036770 -
Lan15g0665 358 Gene3D - 234 306 IPR036770 -
Lan15g0665 358 Pfam Acyl CoA binding protein 108 188 IPR000582 GO:0000062
Lan15g0665 358 MobiDBLite consensus disorder prediction 72 99 - -
Lan15g0665 358 Pfam Ankyrin repeats (3 copies) 245 333 IPR002110 GO:0005515
Lan15g0665 358 PANTHER ACYL-COA-BINDING DOMAIN-CONTAINING PROTEIN 2 1 354 - -
Lan15g0665 358 SUPERFAMILY Ankyrin repeat 237 340 IPR036770 -
Lan15g0665 358 ProSiteProfiles Ankyrin repeat region circular profile. 302 334 - -
Lan15g0665 358 ProSiteProfiles Ankyrin repeat region circular profile. 269 301 - -
Lan15g0665 358 PRINTS Acyl-coA-binding protein signature 130 148 IPR000582 GO:0000062
Lan15g0665 358 PRINTS Acyl-coA-binding protein signature 153 168 IPR000582 GO:0000062
Lan15g0665 358 PRINTS Acyl-coA-binding protein signature 174 191 IPR000582 GO:0000062
Lan15g0665 358 SMART ANK_2a 269 298 IPR002110 GO:0005515
Lan15g0665 358 SMART ANK_2a 236 265 IPR002110 GO:0005515
Lan15g0665 358 SMART ANK_2a 302 331 IPR002110 GO:0005515
Lan15g0665 358 SUPERFAMILY Acyl-CoA binding protein 106 196 IPR035984 GO:0000062
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan15g0665 Lan-Chr15 15305479 15310218 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan15g0665 1 352 Acyl Lipid Metabolism Gene Families AT5G53470 60.227 1.14e-140 401
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan15g0665 - - gmx:100816670 518.079
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan15g0665 15 15305479 15310218 Lan15g0665 15 15305479 15310218 ECH
Lan15g0665 15 15305479 15310218 Lan3g0799 3 14886933 14891333 LSH