Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan3g0673 ATGTCCTCAAACATGGAACGACGATTTTACCCTGACTGGACAGATGTCATTCGGTGGTTGAAACATTTCTTGCACCCACAGTTTCTGTTCATCGACGAGAGATATAAACCCAAAACCCTAAGCCCGTTTTCAATCTTCACTGTCTCAGAGAAACGAAACAGAGAGAGTGCGAAAATGGTTGCTGACAAGAGCAAGAAGCTTAAGGTTTCAGAGAAGGAAGAAACGGAAATCGATGGAGAACTCGTCCTTTCGATTGAGAAGTTGCAGGAGATGCAAGACGAGCTCGAAAAGGTCAACGAGGAGGCCAGTGATAAAGTCCTGGAAATAGAGCAGAAGTACAATGAGATACGGAAACCGATCTATGATAAGCGTAATGAGATTATCAAATCTATTCCTGACTTCTGGTTAACTGCTTTTCTGAGTCATCCTGCTCTTGGTGATCTCCTGAATGACGAAGATCAAAAGATATTTAAGTATTTGAGTTCTCTTGAGGTTGAAGATTCTAAAGATGTCAAATCAGGCTATTCAATCACCTTTAATTTCAATCCCAATCCCTATTTTGATGATACAAAGCTTGTAAAGGCTTTCACCTTCCTTGAAGAAGGAACCACAAAGGTTACCGCAACGCCCATAAAATGGAAAGAGGGTAAAGACATAACCAATGGAGTCAATCATGAGAAGAAGGGGAGCAAGCGGGCTCCTATTGATATCAGCTTCTTTAGTTGGTTTTCTGACACTGAGCAGAAAGATGATCTGGATGACATTCATGATGAGGTTGCCGAATTAATCAAGGATGATTTATGGCCAAGTCCACTTACTTATTTCAACAATGAGGAGCCTGACGAAGAGGATGGTGATGAGGACGAAGCTGCTGATGAGGATAAGGATGGAGATGACTCTGAAGATGATGATGCCCAAGAGGATGATGATGAGGGGGAGGATGGTGGCAATTGA 954 0.4235 MSSNMERRFYPDWTDVIRWLKHFLHPQFLFIDERYKPKTLSPFSIFTVSEKRNRESAKMVADKSKKLKVSEKEETEIDGELVLSIEKLQEMQDELEKVNEEASDKVLEIEQKYNEIRKPIYDKRNEIIKSIPDFWLTAFLSHPALGDLLNDEDQKIFKYLSSLEVEDSKDVKSGYSITFNFNPNPYFDDTKLVKAFTFLEEGTTKVTATPIKWKEGKDITNGVNHEKKGSKRAPIDISFFSWFSDTEQKDDLDDIHDEVAELIKDDLWPSPLTYFNNEEPDEEDGDEDEAADEDKDGDDSEDDDAQEDDDEGEDGGN* 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan3g0673 317 SUPERFAMILY NAP-like 75 276 IPR037231 -
Lan3g0673 317 Gene3D Nucleosome assembly protein 132 279 - -
Lan3g0673 317 Coils Coil 81 115 - -
Lan3g0673 317 Pfam Nucleosome assembly protein (NAP) 85 129 IPR002164 GO:0005634|GO:0006334
Lan3g0673 317 Pfam Nucleosome assembly protein (NAP) 129 277 IPR002164 GO:0005634|GO:0006334
Lan3g0673 317 Gene3D - 55 131 - -
Lan3g0673 317 PANTHER TESTIS-SPECIFIC Y-ENCODED PROTEIN 60 306 IPR002164 GO:0005634|GO:0006334
Lan3g0673 317 MobiDBLite consensus disorder prediction 267 317 - -
Lan3g0673 317 PANTHER NUCLEOSOME ASSEMBLY PROTEIN (NAP)-RELATED 60 306 - -
Lan3g0673 317 MobiDBLite consensus disorder prediction 277 317 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan3g0673 Lan-Chr3 11052716 11060208 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan3g0673 K11290 - gmx:100793432 396.356
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan3g0673 3 11052716 11060208 Lan12g1254 12 18465737 18469135 PCT
Lan3g0673 3 11052716 11060208 Lan1g1035 1 20644883 20648470 PCT
Lan3g0673 3 11052716 11060208 Lan1g0088 1 689177 692554 PCT