Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan12g1254 ATGACAAGTTGTGACAACACTAAGAAGTTGAAAGTTGAAGACATTTCTGAAGATATTGATCCACATCTCCTTCTCTCCATCGAGAAGCTTCAGGAGATCCAAGACAACCTCGAAAAGATCAATGAAGAGGCTAATGATAAAGTGCTGGAAGTAGAACAGAAGTACAATGTGATAAGGAAGCCTGTTTACGATAATCGTAACGAGATTATCAAATCTATTCCTGATTTCTGGTTGACTGCTTTTTTGAGTCATCCTGCACTCGGCGAGCTTCTCAATGACGAAGATCAAAAGATATTTAAGTATTTGGATTCTCTTGAGGTTGAAGATAATAAAGATATCAAATCAGGCTACGCAATCACCCTTAATTTCAAGCCAAATCCCTATTTTGAGGATACAAAGCTTACAAAGACTTACACATTCCTCGATGAAGGAGCAACAAAGATTACTGCTACTCCCATAAAATGGAAAGAGGGAAAGAGCATAGCCAACGGTGTTGATCATGAAAAGAAAGGGAACAAGCGGGCTTTTGTTGATGTCAGTTTCTTTAGTTGGTTTAGTGACGGTGAGGAGAAAGATGATGATTTGGATGACATTCATGATGAGATTGCAGACTTAATAAAGGAGGATTTATGGCCAAATCCACTCACTTATTTCAACAATGAGGTCCCTGATGATGTAGAGCCTATTGGTGAACCTTTTGAGGATGATGATGAGAATGACTCTGAAGATGATGACAATGAGGAGGAGGATGAATAG 756 0.3889 MTSCDNTKKLKVEDISEDIDPHLLLSIEKLQEIQDNLEKINEEANDKVLEVEQKYNVIRKPVYDNRNEIIKSIPDFWLTAFLSHPALGELLNDEDQKIFKYLDSLEVEDNKDIKSGYAITLNFKPNPYFEDTKLTKTYTFLDEGATKITATPIKWKEGKSIANGVDHEKKGNKRAFVDVSFFSWFSDGEEKDDDLDDIHDEIADLIKEDLWPNPLTYFNNEVPDDVEPIGEPFEDDDENDSEDDDNEEEDE* 252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan12g1254 251 Coils Coil 23 54 - -
Lan12g1254 251 SUPERFAMILY NAP-like 12 219 IPR037231 -
Lan12g1254 251 MobiDBLite consensus disorder prediction 216 251 - -
Lan12g1254 251 Gene3D Nucleosome assembly protein 74 222 - -
Lan12g1254 251 PANTHER NUCLEOSOME ASSEMBLY PROTEIN (NAP)-RELATED 10 248 - -
Lan12g1254 251 MobiDBLite consensus disorder prediction 227 251 - -
Lan12g1254 251 Pfam Nucleosome assembly protein (NAP) 71 220 IPR002164 GO:0005634|GO:0006334
Lan12g1254 251 Gene3D - 3 73 - -
Lan12g1254 251 PANTHER TESTIS-SPECIFIC Y-ENCODED PROTEIN 10 248 IPR002164 GO:0005634|GO:0006334
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan12g1254 Lan-Chr12 18465737 18469135 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan12g1254 K11290 - gmx:100808081 349.747
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan12g1254 12 18465737 18469135 Lan1g1035 1 20644883 20648470 LSH
Lan12g1254 12 18465737 18469135 Lan1g0088 1 689177 692554 LSH
Lan3g0673 3 11052716 11060208 Lan12g1254 12 18465737 18469135 PCT