Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan3g0412 ATGTCGCCGTCAAATGTGTTGCAGAACAACGGCGGCGGTGGCGGTGGTAATGGGTTGAATCATATTGAGCATCAGGTTTCAAAGCTTGATACTCTTGCTGGTGTAGCCATCAAGTATGGTGTTGAGGTAGCTGACATCAAAAGGATGAATGGGTTAGCCTCGGATCTTCAAATGTTTGCCGTGAAGACATTGAGAATTCCATTACCAGGACGACATCCACCATCTCCCATTCCAACTCAGTCTAACGGACATGCCAAGCAAGGAAACTCTTTTTTAATTGAAACTTGTTGCAGAGATGATAGTTTTGGAAGGAGATCCCTACCAAGAAGTAAAGCTGGCATGAAGGAACCTCTTCAGTCCTCAAGACCGAAAGCACCTAAACCGGAGCTTTCTCCAGCTATGACCATTTTACAGAAATACTATGGACTCAGATCTTCGAAGTTTACAGATACATTTGAAGGAACTGAAATGGCAGCTTATACATCTGCAAGTTCAGATCATTCTAGTGATGAATGGCTTCCAAAAGCCTCACCAATTTCGGACTTTCCGTCAGATCACTACCCCAAGTCAACAAATCTAGTGTATGATCTACTGACTGGGAACAATGAAGTGTCGGAGGATGTGCCTCTTTCAGAAATTGGAGATGTAGGAAGCGAGAAGTCTGATGAGAAGTCTGTCCGTAGACGTCAGAAAGCTGAAGTTGATGGTGGAGATGGTTCACCTGAAAGGATCTTGAAAGAAGGAAATAGTAGTGGCGGTTCAAATGGCTTTTCTTCAACTGGAAAACCATTATCTGGGAGGACAAAATCAGCGAGTCGTGCAGTGCTGTTTCCTGAATCAGAATCAGGATGGTTAGATTCTATTGCAGTGGGTTTGGGAGAATCTATATTGACCAATGGGTTTTCTGGAGTGCGCAAATCATCAAGTGCGATGAGCCTAAGGGACCAGGAGAGGAACAATTCAGCAACAGTGTGGCCACCAAGATGGAGTTTGAAACCAGACTTGCAAGCAGCCATTGGCAAACCTATCTTTGATGGCTTACCTATCCCGACAACTTCCCGCAGGGGCAAAACTGCCCTTGATTAG 1086 0.4484 MSPSNVLQNNGGGGGGNGLNHIEHQVSKLDTLAGVAIKYGVEVADIKRMNGLASDLQMFAVKTLRIPLPGRHPPSPIPTQSNGHAKQGNSFLIETCCRDDSFGRRSLPRSKAGMKEPLQSSRPKAPKPELSPAMTILQKYYGLRSSKFTDTFEGTEMAAYTSASSDHSSDEWLPKASPISDFPSDHYPKSTNLVYDLLTGNNEVSEDVPLSEIGDVGSEKSDEKSVRRRQKAEVDGGDGSPERILKEGNSSGGSNGFSSTGKPLSGRTKSASRAVLFPESESGWLDSIAVGLGESILTNGFSGVRKSSSAMSLRDQERNNSATVWPPRWSLKPDLQAAIGKPIFDGLPIPTTSRRGKTALD* 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan3g0412 361 MobiDBLite consensus disorder prediction 342 361 - -
Lan3g0412 361 ProSiteProfiles LysM domain profile. 22 66 IPR018392 -
Lan3g0412 361 SMART LysM_2 23 67 IPR018392 -
Lan3g0412 361 MobiDBLite consensus disorder prediction 103 131 - -
Lan3g0412 361 SUPERFAMILY LysM domain 22 67 IPR036779 -
Lan3g0412 361 PANTHER LOC443603 PROTEIN-RELATED 16 361 IPR045030 -
Lan3g0412 361 Gene3D LysM domain 18 73 IPR036779 -
Lan3g0412 361 MobiDBLite consensus disorder prediction 206 268 - -
Lan3g0412 361 CDD LysM 22 66 IPR018392 -
Lan3g0412 361 MobiDBLite consensus disorder prediction 216 242 - -
Lan3g0412 361 Pfam LysM domain 24 67 IPR018392 -
Lan3g0412 361 PANTHER PEPTIDOGLYCAN-BINDING LYSM DOMAIN-CONTAINING PROTEIN 16 361 - -
Lan3g0412 361 MobiDBLite consensus disorder prediction 247 267 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan3g0412 Lan-Chr3 3543799 3547132 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan3g0412 - - aip:107644597 479.559
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan10g0489 10 3794925 3798055 Lan3g0412 3 3543799 3547132 LSH