Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan3g0258 ATGTTTGGATTGTGTATCAAGCTCTTCCTTATTTCTGCAACAACAAGAACAAGATCATGCTTTTCCTCCAAAATTCACCCAGTTTCTGTGATTGTGACCAAGAAGAGACCCAAAATTAGTGTTCAAACTCAAACTGAACACCAAAAGATTTTGATGCTGTGTCAGATTCCTACTCATGAGATTGAAGGATTTGCATACAAAGGAGCAAATGAATTGGCTCACCACAGTGAATCACCTGCCTACTGGGAAAAGGTGCTTGAAGGGATTGGCAAAATGAAGTGTGTTGCATATGATCCAGTAGACACTATGGAATGGGACAAAGCTGGTGATAATCTTCCACCCAAGGAAAGAAGATTTGCTGTACTGGCATCATCCCTTTTATCAAGCCAAACTAAGGAGCATGTTACTCGTGGAGCAACTCGACGCCTTCATGAAAATGGTCTGCTTACTGCTGATGCTATCGAAAAAGCGGATGAAGAAACCATCAGAAAGTTGATTTACCCTGTTGGGTTTTATTCAAGAAAAGCCAGTAACTTGAAGAAAATTGCCAATATTTGTCTCATGAAGTATGATGGAGACATACCAAGCTCAATTGAAGAACTACTCTTACTTCCAGGAGTAGGTCCTAAGATATCTCATTTGGTTATGATTCTTGGATGGAACAATGTCCAAGGAATATGTGTAGATACTCATGTTCACCGTATTTGCAATAGACTTGGATGGGTTTCAAGATCAGCCTCAAAACAGAAAACTTTGATGCCTGAAGAAACAAGAGTGGCGCTGCAACGGTGGCTTCCAAGGGAAGAATGGGTTCCAATAAATCCTCTTCTGGTTCTGTCCATCAGCATTCAAGGACACTCCAAATTCATCATTCAAGTCCAAAAAGTCTGCACTGAACAAGAAGCTTTAATCAAACTGATTATTTTGTTTAAGGTTTGA 939 0.4004 MFGLCIKLFLISATTRTRSCFSSKIHPVSVIVTKKRPKISVQTQTEHQKILMLCQIPTHEIEGFAYKGANELAHHSESPAYWEKVLEGIGKMKCVAYDPVDTMEWDKAGDNLPPKERRFAVLASSLLSSQTKEHVTRGATRRLHENGLLTADAIEKADEETIRKLIYPVGFYSRKASNLKKIANICLMKYDGDIPSSIEELLLLPGVGPKISHLVMILGWNNVQGICVDTHVHRICNRLGWVSRSASKQKTLMPEETRVALQRWLPREEWVPINPLLVLSISIQGHSKFIIQVQKVCTEQEALIKLIILFKV* 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan3g0258 312 Pfam HhH-GPD superfamily base excision DNA repair protein 124 251 IPR003265 GO:0006284
Lan3g0258 312 SMART endo3end 127 283 IPR003265 GO:0006284
Lan3g0258 312 Pfam Helix-hairpin-helix motif 189 210 IPR000445 GO:0003677
Lan3g0258 312 Gene3D - 219 301 IPR023170 -
Lan3g0258 312 CDD ENDO3c 119 278 IPR003265 GO:0006284
Lan3g0258 312 SUPERFAMILY DNA-glycosylase 113 279 IPR011257 GO:0003824|GO:0006281
Lan3g0258 312 Gene3D Hypothetical protein; domain 2 102 218 - -
Lan3g0258 312 PANTHER ENDONUCLEASE III HOMOLOG 2, CHLOROPLASTIC 38 278 - -
Lan3g0258 312 PANTHER ENDONUCLEASE III-LIKE PROTEIN 1 38 278 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan3g0258 Lan-Chr3 1677344 1681414 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan3g0258 K10773 - gmx:100818398 342.428
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan3g0258 3 1677344 1681414 Lan13g0285 13 1838963 1842800 PCT
Lan13g0285 13 1838963 1842800 Lan3g0258 3 1677344 1681414 PCT