Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan2g1342 ATGAGGCAAACTAACGAAGCTGGTTTCTTCAGAACCATTTCATCTTCTTCCATCTCAAACCTTCTTCCTAAATCACTCTCTTCTAATTTCAACCGTAAATCATCATCATCCTCAAACCCTAAAATCCCAATTTCAGAACTTGAAAACACTCCTCCTAAAGATCCAAACATCCCGATCAACCATCACCATTCATTGAAGCATCAATTACACTCCAAAACCCCATTTTCAAACAATGTAAAACTCACCGATTCGAAACCCACTCTTGAATCGGATCCATCGGTGAAGATGAAGGATGGCTCCAAACATGCTTTCAATATAGAGAATCTCACTGAGGAATATGTCACTAGCTATGACGATGTAACACAAATTCTAATTAAGGGCCTTTCGAGCAGAAAAGTTGGAGCAACGAGCTTAAATTCTAAGAGCTCTAGATCACATATCATTTTCACCTTTGTGATCGAGTCTTGGTGTAAGGGAACCTCATCAAGTGGTTTCAGTAGTTCAAAAACTAGCAGAATTAGCCTTATTGATCTTGCTGGACTGTACAGGAACAAAGTTGATGATGCTGGGAGACAACATCTAAGGGAGAACAGAAATGTAAAGAAGTCCTTATCTAAGCTTGGGCACTTAGTTGATGCTCTGACTAAAAAAACTCACTCAGGAAAAGGTGAACAAATTCCAAACAGGGATTCCTGTTTAACACGTTTACTACAAGAATCACTTGGTGGAAATGCCAAACTCTCATTAATCTGTTCCATCTTTCCTGATAACAAGGATAACGGTGAAACACTGCACACACTCAGATTTGGACAGCGAGTAAGATCCATTAGAAATGAGCCAGTTATCAATGAAATAAAGGAGGATGATGTTAATGATTTGAGCGATAAAATCCGGCAGTTGAAGGAAGAACTTATTAGAGCAAAGGCAGATGGTCATAGTTCATTTGGTAGTATGAATGGATTCTTTCAAGGTCATAATGTACGGGAAAGCCTTAATCAGTTGAGGGTCAGCTTAAACCGATCTCTACTCCTACCTCACATTGACGACACTACTGATGAAGAGGTCCATGTGGATGAAGAGGATATAAGGCAATTACACCAGCAGATTGTTGAGATGTATAATTCTTGTGAAGAGAATCCCAAAGAGATATCTGTCAGTGAAGATTGTGTCCAGTATTATTCTGTTGATGGAAGTTGTGACACAGATAAAATCTGTGGTGATGAAGTTGAGAAAGAGGAAGTATGTTCTGGAGAAATGTCGAGTAGGCTTTGTCATGAGGACAGTGTGGTATCAGGTAACACCTTGTATGCATCGGTAGATGACCTTGAATCCATATCTAGCGCCTCAAGGGCAATTAAATCCACATTCAGAGACAGTATTTCGGTTAGTTCATGCTACCAATCTCCAATACTTGAGGAACCACCGTTGTCTGAGTCTCCAAAGATCAGGAATACCAAGAGGAAAAGCCAAATGTCACTTTCATCTAGTTGTCTTGGAAGTTGGAACAATGTAGCTGTGGAGAATTCAAGTTCCAATGAAGTTGTGTTAGGACAACAATTTATACAAGGTGATCATTTGCGATCTTCATTGCGGTCAAGCAAGGTTTCACCAGGCCCAACAGAGTCCTTGGCAGCAAGTCTTCAAAGGGGATTACAGATAATTGATTATCACCAGCAGAACTCAGCACTGACCAAATCTTCAGTTTCCTTCTCTTTTGGGCGTTCAATCTTGACATGTTGTCCAGAAACAGACATGGGTGAGAAATCTTCAAATGATGGAAGAACTGCTAATTTGCTTTGTGAATCTTGCCGTAAAAAAATATCAGATCAGGATTCCAGTGAGGTCCAAGACAGCTTGAAGCCAAGTATTGACACAGATAAAGTTCCAAAAGATTTAGAGACTGTAATGGCAAAATCCATTTTGAGAGAGAAGGAGCTTGAAAATGTTTGCAAGGAGCAAGCAGCTAGAATTGAGGAACTAAATCGATTGGTGGAGAAATTGAAAGGAGAAAAAGTAGACTCGGTCATTGTATACGAAAGCAACAAGCAAACCAAACATGAAGAAGAGTGTAACAACTCACAGAAGGATGAAAACAAGCTTCTGATGGGCACTTCCTCAGACAATCATTTAGCAGCAATTATAGAGGAAAAATGTGAAATTAAAGAAGTCCAGGAAGAATTAACTCAGAGAGTCAGCTCTTTTGATGCTACCGAGAAAGAAGAACTGCTTAAGGAAATTCAAAATCTAAGATGCAAGGTGCAACTATATGATGATGCACCCGTTAAAAAGTCCACAGACAAATTGAGATCTTCATTAATATCAAGATCCATTCAAGTGCGAAAAAGTGGTGTGTTTTTTCGTGATAATGGTGGGGAAGAGCTAGAGAAAGAAAGACAGCGGTGGACCGAAATGGAAAGTGAGTGGATTTGTCTTACTGATGAACTAAGAGTTGATCTTGACTCCATTCGCCAGCGAGCAGAGCGGGTGGAGCTGGAACTGAGGTTAGAGAAGAAGTGCACTGAGGAGTTGGATGATGCACTAAAAAGATCGGTCATTGGACATGCTAGAATGGTAGAACACTATGTTGACCTTCAAGAAAAATATAACGATCTGGCTGCGAAGCACAATGCTATAATGGAAGGCATAGCAGAGGTGAAGAAGGCAGCAGCAAAGGCTGGAAAAAAGGGTCATGCCCGTTTTGCCAAATCTCTTGCCGCTGAGCTTTCTGCATTGAGGGTGGAGAGAGAAAGGGAAGCAAAATTCTTGAAAAAGGAGAATACAAGTCTCAAGATTCAACTTAGAGACACTGCAGAAGCTGTTCATGCAGCTGGGGAATTACTTGTAAGACTCAAAGAAGCTGAGCATGCAGCAACTGTGGCAGAGGAGAATTTCACAAGATTGCAACAAGATAATGAACAGCTTAGAAAGAAAATGGAAAAGGTCAAAAGAAAGCACAAGATGGAGATGATTACAACGAAGCAGTATCTCGCAGAGAGCAAGTTACCAGAATCTGCACTCAAACCACTATATAGAGAGGGGTCCGATGCGGCTGTACACAACAATGCAGACGATGATCAGGCATGGAGAGCAGAATTTGGAGCAATCTATCAAGAACATTATTAG 3123 0.4063 MRQTNEAGFFRTISSSSISNLLPKSLSSNFNRKSSSSSNPKIPISELENTPPKDPNIPINHHHSLKHQLHSKTPFSNNVKLTDSKPTLESDPSVKMKDGSKHAFNIENLTEEYVTSYDDVTQILIKGLSSRKVGATSLNSKSSRSHIIFTFVIESWCKGTSSSGFSSSKTSRISLIDLAGLYRNKVDDAGRQHLRENRNVKKSLSKLGHLVDALTKKTHSGKGEQIPNRDSCLTRLLQESLGGNAKLSLICSIFPDNKDNGETLHTLRFGQRVRSIRNEPVINEIKEDDVNDLSDKIRQLKEELIRAKADGHSSFGSMNGFFQGHNVRESLNQLRVSLNRSLLLPHIDDTTDEEVHVDEEDIRQLHQQIVEMYNSCEENPKEISVSEDCVQYYSVDGSCDTDKICGDEVEKEEVCSGEMSSRLCHEDSVVSGNTLYASVDDLESISSASRAIKSTFRDSISVSSCYQSPILEEPPLSESPKIRNTKRKSQMSLSSSCLGSWNNVAVENSSSNEVVLGQQFIQGDHLRSSLRSSKVSPGPTESLAASLQRGLQIIDYHQQNSALTKSSVSFSFGRSILTCCPETDMGEKSSNDGRTANLLCESCRKKISDQDSSEVQDSLKPSIDTDKVPKDLETVMAKSILREKELENVCKEQAARIEELNRLVEKLKGEKVDSVIVYESNKQTKHEEECNNSQKDENKLLMGTSSDNHLAAIIEEKCEIKEVQEELTQRVSSFDATEKEELLKEIQNLRCKVQLYDDAPVKKSTDKLRSSLISRSIQVRKSGVFFRDNGGEELEKERQRWTEMESEWICLTDELRVDLDSIRQRAERVELELRLEKKCTEELDDALKRSVIGHARMVEHYVDLQEKYNDLAAKHNAIMEGIAEVKKAAAKAGKKGHARFAKSLAAELSALRVEREREAKFLKKENTSLKIQLRDTAEAVHAAGELLVRLKEAEHAATVAEENFTRLQQDNEQLRKKMEKVKRKHKMEMITTKQYLAESKLPESALKPLYREGSDAAVHNNADDDQAWRAEFGAIYQEHY* 1041
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan2g1342 1040 PANTHER KINESIN-LIKE PROTEIN KIN-12F 94 1040 - -
Lan2g1342 1040 MobiDBLite consensus disorder prediction 25 96 - -
Lan2g1342 1040 Coils Coil 643 670 - -
Lan2g1342 1040 Pfam Kinesin motor domain 90 276 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lan2g1342 1040 Coils Coil 812 832 - -
Lan2g1342 1040 PANTHER CENTROMERE PROTEIN E 94 1040 - -
Lan2g1342 1040 Coils Coil 739 759 - -
Lan2g1342 1040 Coils Coil 950 984 - -
Lan2g1342 1040 SMART kinesin_4 1 284 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lan2g1342 1040 MobiDBLite consensus disorder prediction 25 45 - -
Lan2g1342 1040 PRINTS Kinesin heavy chain signature 136 153 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lan2g1342 1040 PRINTS Kinesin heavy chain signature 172 190 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lan2g1342 1040 PRINTS Kinesin heavy chain signature 226 247 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lan2g1342 1040 ProSiteProfiles Kinesin motor domain profile. 1 276 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lan2g1342 1040 Gene3D Kinesin motor domain 71 314 IPR036961 -
Lan2g1342 1040 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 92 308 IPR027417 -
Lan2g1342 1040 Coils Coil 283 310 - -
Lan2g1342 1040 Coils Coil 905 925 - -
Lan2g1342 1040 MobiDBLite consensus disorder prediction 70 89 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan2g1342 Lan-Chr2 24166167 24172031 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan2g1342 106 304 Miscellaneous Gene Families AT5G06670 37.811 6.00e-28 119
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan2g1342 K10400 - gmx:100806960 1323.92
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan2g1342 2 24166167 24172031 Lan2g1342 2 24166167 24172031 ECH
Lan2g1342 2 24166167 24172031 Lan11g0049 11 300003 307328 LSH
Lan2g1342 2 24166167 24172031 Lan2g1342 2 24166167 24172031 PCT
Lan2g1342 2 24166167 24172031 Lan11g0049 11 300003 307328 PCT
Lan11g0049 11 300003 307328 Lan2g1342 2 24166167 24172031 PCT