Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan11g0049 ATGAGGCAAAACAGCAACAACGCTAAAACTTCCAAATCTGGTTTCTTAAGCACCATTTCTAAATCACTCTCTTCCAATTCCAACCGCAAATCATCATTTACTTCATTCTCAACAAACGAAAACTCCCCTCCAACTCATCCCAATATTCAGATCAATGAACAACTCACCCAACCGGAACACCCTCTTCAATTTGATCCTTCGGTGAAGGTTGTGGTACGAATTAGACCTAGCAACACAGGGGAAAGAGAGGGGAATCAAACGGTTAAGAAGGTTTCTTCTGGTACCTTGTGTGTTGGTGATAGGCAATTTACATTTGATTCAGTTTTCGACTCGAATTCCAATCAGGAAGATATTTTTCAAACAGTGGGTGTTCCCTTGGTTAAAAATGCTATAGCTGGTTATAATACTTCAGTTCTATCATATGGCCAGTCTGGAAGTGGAAAAACTTATACAATGTGGGGTCCCCCAAGTGCAATGTTTGAGGAACCCTCACTGCAAAGTCATAAGGGAGTTGTTCCTCGGATCTTCCAAATGTTATTTTCTGAGCTTGAAAGAGAGCAGCAGATGTCTGAGGGGAAACAGTTCAACTATCAATGCCGATGTTGTTTTCTCGAGATATACAATGAACAAATAGGGGATTTACTTGATCCAACACAGCGTAACCTTGAGATGAAGGATGGCTCCAAACATGCTTTGTGTATAGATAATCTCACTGAGGAATATGTCACTAGCTATGATGATGTAACACAAATTCTGATTAAGGGCCTTTCAAGCAGAAAAGTTGGAGCAACGACCTTAAATTCTAAGAGCTCTAGATCACATATCATTTTCACATTTGTCATTGAGTCTTGGTGTAAGGGAATCTCATCAAGTGGTTTCAGTAGTTCAAAAACTAGCAGAATTAACCTCATTGATCTTGCTGGACTGGACAGAAATAAAGTTGATGATGCTGGCAGACAACATCTAAGGGAAAACATAAATGTAAAGAAGTCCTTATCTCAGCTTGGGCACTTAGTTGATACTCTGACTAAAAAAACTCAGTCAGGAAAAGCTGAACAAATTCCAAATGGGAATTCCTGTTTAGCACATTTACTACAAGAATCACTTGGTGGAAATGCCAAACTCTCAGTAATCTGTTCCATATCTCCTGATAACAAGAATAATGGTGAATCATTGCACACACTCAGATTTGGACAGCGAGTAAGATCCATTAGAAATGAGCCAGTTATCAATGAAATAAAGGAAGATGATGTGAATGATTTGAGTGATAAAATCCGGCTACTGAAGGAAGAACTTATCAGAGCAAAAGCAGATGGTCATAGTTCTATTAGTGGTATAAATGGATACTTTCAAGGTCATAATGTACGGGAAAGCCTTAATCAGTTGAGAGTCAGCTTAAATCGATCTCTACTCCTACCTCACATTGATAACACCACTGATGAAGAGGTGCATGTGGATGAGGAGGATATAAGGCAATTACGCCAGCAGATTGATGAACTGTATGGTTCATGTGAACAGAATCCTAAAGAGATATCTGTCAGTGAAGATTGTGTCCAGTATTATTCTGTTGAGGAAAGTTGTGACACAGATAAGATCAGTGACAATGAAGTTGAGAAAGAGGATGTTTGTTCTGGAGAAATGTTGAGTGGTAAGCTTCATCACGAGGACAGTGTGCTATCAGGTAACACCTTGTATACATCGGTAGATGACCTTGAATCCATATCTAGCACCTCAAGGGCAATTAAATCCACATTCAGAGACAGTATTTCGGTTAGTTCATGCTACCGATCTCCAATACTTGAGGAACCACCATTGTCTGAGTCTCCAAAGATCAGGAGTACCAAGAGGAAAAGCCAAATATCATTTTCATCGAGTTGTCTTGGAAGTTGGAAAAATGTGGCAGAGGAGAAGGTGAGTTCCAATCAAGATATTTTGGGACAATCATTTATACAAGGTGATCACCTGCGATCCTCATTGCGGTCAAGCAAGGTTTTACCAGGCCCAGCAGAGTCATTGGCAGCAAGCCTTCAGAGGGGATTACAGATAATTGATTATCACCAGCAGAACTCAGCACTAACGAAATCCTCAGCTTCCTTCTCTTTTGGACGTTCAACCTTGATACCCTGTCCAGAAATAGACAAGGATGAGAAATTTTCATTTGACGAAAGAAATGTTAATTTGCTTTGTGAATCTTGTCGTAAAAAAATACCAGATCAGGATTCTAGCGAGGTCCAAGACAGCTTGAAGTCAAGTATTGACACAGTTAAAGTTCCAAAAGATTTGGAAAATGTAATGGAGAAAGCCATCTTACGAGAAAAGGAGCTTGAGAATGTTTGCAAGGAGCAAGAAGCTAGAATTGAGGAACTAAATAAACTGGTGGAGAGTTTGAAAGGAGAAAAAGAACTAGACTCCATCATTGTGTATGGTCAAGAAAGCAGCAGGCAGACTAAACATGAAGAAGAGTATAACAAATCACAGAAAGATGAAGACAAGCTTCAGGTTGGTGCTACCTCAGCCAGTCATTTAACAGATATTGTAGAGGAAAAATATGAAATTAAAGAAGTCCAGGAAGAATTAAGACAAGGAATCAGCTCTTTTGATGCTGCTGAGAAAGAAGAACTTCTTAAGGAGATTCAAAATCTTAGAAGCAAGCTTCAACTATGTAGCGAAGCACCAGTTAAAAGGTCCACTGACAGACTGAGATCTTCATTAATATCAAGATCCATTCAACTGCATAAAAGTGGTGTGTTTTTCCATGATAATGGTGGGGAAGAGCTGCAGAAAGAAAGACAGATATGGACAGAAATGGAGAGTGAGTGGATTTGTCTTACTGATGAGCTAAGAGTTGATCTCGATTCCATTCGCCAGCAAGCTGAGAGGGTGGAGCTGGAACTGAGGTTAGAGAAGAAGTGCACTGAGGAGTTGGATGATGCACTAAAAAGATCTGTTCTTGGACATGCTAGAATGGTAGAACACTATGCTGACCTCCAAGAAAAATATAATGACTTGGTTGCAAAGCACAATGCTATAATGCAAGGCATAGCAGAGGTCAAGAAGGCAGCAGCAAAGGCTGGAAAAAAGGGTCGTGCCCGCTTTGCCAAGTCTCTTGCTGCCGAGCTTTCTGCATTGAGGGTAGAGAGAGAAAGGGAAGCAAAATTCTTGAAAAAGGAGAACGTGAGTCTCAAGATTCAACTTAGAGACACTGCAGAAGCTGTTCATGCAGCTGGAGAACTACTTGTAAGACTCAGAGAAGCTGAGCATGCAGCGTCTGTTGCAGAGGAGAATTTCACAAGAGTGCAACAAGATAATGAAAAGCTTAGAAAGCAATTGGAGAAGCTAAAAAGAAAGCATAAGATGGAGACGATCACGATGAAGCAGTACCTAGCAGAGAGCAAATTACCAGAATCTGCACTGAAACAACTATATAGAGAGGAGTCTGATGTAGCAGTACACAGCAATGCAGATGATGATGAAGCATGGAGAGCAGAATTTGGAGCAATCTATCAAGAGCATTATTAG 3519 0.4032 MRQNSNNAKTSKSGFLSTISKSLSSNSNRKSSFTSFSTNENSPPTHPNIQINEQLTQPEHPLQFDPSVKVVVRIRPSNTGEREGNQTVKKVSSGTLCVGDRQFTFDSVFDSNSNQEDIFQTVGVPLVKNAIAGYNTSVLSYGQSGSGKTYTMWGPPSAMFEEPSLQSHKGVVPRIFQMLFSELEREQQMSEGKQFNYQCRCCFLEIYNEQIGDLLDPTQRNLEMKDGSKHALCIDNLTEEYVTSYDDVTQILIKGLSSRKVGATTLNSKSSRSHIIFTFVIESWCKGISSSGFSSSKTSRINLIDLAGLDRNKVDDAGRQHLRENINVKKSLSQLGHLVDTLTKKTQSGKAEQIPNGNSCLAHLLQESLGGNAKLSVICSISPDNKNNGESLHTLRFGQRVRSIRNEPVINEIKEDDVNDLSDKIRLLKEELIRAKADGHSSISGINGYFQGHNVRESLNQLRVSLNRSLLLPHIDNTTDEEVHVDEEDIRQLRQQIDELYGSCEQNPKEISVSEDCVQYYSVEESCDTDKISDNEVEKEDVCSGEMLSGKLHHEDSVLSGNTLYTSVDDLESISSTSRAIKSTFRDSISVSSCYRSPILEEPPLSESPKIRSTKRKSQISFSSSCLGSWKNVAEEKVSSNQDILGQSFIQGDHLRSSLRSSKVLPGPAESLAASLQRGLQIIDYHQQNSALTKSSASFSFGRSTLIPCPEIDKDEKFSFDERNVNLLCESCRKKIPDQDSSEVQDSLKSSIDTVKVPKDLENVMEKAILREKELENVCKEQEARIEELNKLVESLKGEKELDSIIVYGQESSRQTKHEEEYNKSQKDEDKLQVGATSASHLTDIVEEKYEIKEVQEELRQGISSFDAAEKEELLKEIQNLRSKLQLCSEAPVKRSTDRLRSSLISRSIQLHKSGVFFHDNGGEELQKERQIWTEMESEWICLTDELRVDLDSIRQQAERVELELRLEKKCTEELDDALKRSVLGHARMVEHYADLQEKYNDLVAKHNAIMQGIAEVKKAAAKAGKKGRARFAKSLAAELSALRVEREREAKFLKKENVSLKIQLRDTAEAVHAAGELLVRLREAEHAASVAEENFTRVQQDNEKLRKQLEKLKRKHKMETITMKQYLAESKLPESALKQLYREESDVAVHSNADDDEAWRAEFGAIYQEHY* 1173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan11g0049 1172 Pfam Kinesin motor domain 87 404 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lan11g0049 1172 MobiDBLite consensus disorder prediction 1 50 - -
Lan11g0049 1172 PANTHER CENTROMERE PROTEIN E 49 1172 - -
Lan11g0049 1172 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 67 436 IPR027417 -
Lan11g0049 1172 Coils Coil 1082 1130 - -
Lan11g0049 1172 ProSiteProfiles Kinesin motor domain profile. 67 404 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lan11g0049 1172 PANTHER KINESIN-LIKE PROTEIN KIN-12F 49 1172 - -
Lan11g0049 1172 Coils Coil 944 964 - -
Lan11g0049 1172 Coils Coil 765 799 - -
Lan11g0049 1172 PRINTS Kinesin heavy chain signature 133 154 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lan11g0049 1172 PRINTS Kinesin heavy chain signature 264 281 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lan11g0049 1172 PRINTS Kinesin heavy chain signature 300 318 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lan11g0049 1172 PRINTS Kinesin heavy chain signature 354 375 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lan11g0049 1172 SMART kinesin_4 65 412 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lan11g0049 1172 Coils Coil 1037 1057 - -
Lan11g0049 1172 Gene3D Kinesin motor domain 64 443 IPR036961 -
Lan11g0049 1172 Coils Coil 411 438 - -
Lan11g0049 1172 Coils Coil 852 891 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan11g0049 Lan-Chr11 300003 307328 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan11g0049 58 432 Miscellaneous Gene Families AT5G06670 30.890 3.21e-48 182
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan11g0049 K10400 - gmx:100806960 1634.39
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan2g1342 2 24166167 24172031 Lan11g0049 11 300003 307328 LSH
Lan2g1342 2 24166167 24172031 Lan11g0049 11 300003 307328 PCT
Lan11g0049 11 300003 307328 Lan2g1342 2 24166167 24172031 PCT