Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan2g1336 ATGTTGACTTATAATTCCACACCTGAAAAATCAATGGCACCATCAATTTTTCTGCTTCTTTTATCTCTTGTGTTAATTCCAACAAGTGTTGTTGTTGTTGTTGTTGGTCTCCAACATGTTCATGAAGAAGATGGTTTCATCTCTGTGGTGATATCTGATAAGGGTCTTGATTTTGCAAAACAGTTTCTGATAGAACAAGCTATATCCTCTATTGTTCCCTCTCAACTTTCAGATATTGAGAAGAAAGTCAACGTGCCACTTGTTGGAAAAGCTCAAGTGATTCTTTCTGAGATCACAATCAAAGATATCAAAATAAATAGTTCATCTGTTAAGACAGGTGAATCAGGCATTGTTCTAATTGTTTCAGGTGCCACTGCAGATTTAACTATGAATTGGAGGTATACTGCAAGAACTTCATTAGTTCCAATTGGAATTTCAGATAGTGGTACTGCCACTGTGAAGGTTGAAGATCTGCAAGTCGGGCTTACCGTAAATCTCAGGAATCAAGAAGGAACTCTTGAGTTGATTCTCTTAGATTATGGATGTAAAGTTGGAGATTTATCTATAAAGTTGAGTGGTGGAGCAGCTTGGCTTTACCAAGTACTAGTAGAAGTTTTTGAAGGGAATATAGCATCTTCAGTTGAAGAGGCCATTTCTCAGAAAATAAGAGAAGGGATAACCCAGCTTGACACTATACTGCAATCTCTTCCGAAGACAGTTTCGTTAGACAAAACTGCTGTACTAAATGTTTCATTCGTCGGCAATCCTGTGCTGACTAATTCTTCTATTGAACTTGAAATCAATGGTTTATTCACAGGGACAAGTAAAGTTTTAGTACCTCAAACTTACCATAGAGGACCGGAGATTTCTGTTCCCCGTCCTGGCTCACCAAGGATGATAGAGATTTCAGTACATGAAAATGTTTTGAAATCTGCTTCATCAGTTTACTTTACTGCAGATAGTATGCAATGGATTGTTGATGAGGTACCTGATCAGGCCCTTTTGAACACTGCTGAATGGAGATTCATTGTTCCTCAATTATACAAGCAATATCCAAATGCTGACATGAATATTAATGTCTCCGTATCGTCTGCACCGGTTATTCAAGTCACCAACCAAGATATTGAAGCTGCTATTATTGTAGATGTGATAGTTAATGTTCTCGAAGCTGGCGAAGTCATTCCTGTTGTCTGCATCTCAGTGGACATAAGTGCTTCAGTTGATGTGAAAATAGCAAAAAGCAATATTGCTGGTAGGCTTGCATTGGATAAGTTTTCTATATACTTAAAATGGAGCAAAATAGGAAAGTTGCACATTCAAGTGATTCAGTCAGTGGTGTCAAGTGTACTAAAAACTGTGCTCATACCATTCCTGAACTCACAATTAAAGAAGGGAATACCATTGCCAATGCTGAATGGTTTTGCCCTTGAGAATGCTGCTATCTTGTATGCTCACCCATGGGTTACAGTGTCTACTGATGTTGCCTTTTTGGGACATTCCTTTCTCAGACAGAAGACAGCTTATGATGTTTTATAA 1536 0.3815 MLTYNSTPEKSMAPSIFLLLLSLVLIPTSVVVVVVGLQHVHEEDGFISVVISDKGLDFAKQFLIEQAISSIVPSQLSDIEKKVNVPLVGKAQVILSEITIKDIKINSSSVKTGESGIVLIVSGATADLTMNWRYTARTSLVPIGISDSGTATVKVEDLQVGLTVNLRNQEGTLELILLDYGCKVGDLSIKLSGGAAWLYQVLVEVFEGNIASSVEEAISQKIREGITQLDTILQSLPKTVSLDKTAVLNVSFVGNPVLTNSSIELEINGLFTGTSKVLVPQTYHRGPEISVPRPGSPRMIEISVHENVLKSASSVYFTADSMQWIVDEVPDQALLNTAEWRFIVPQLYKQYPNADMNINVSVSSAPVIQVTNQDIEAAIIVDVIVNVLEAGEVIPVVCISVDISASVDVKIAKSNIAGRLALDKFSIYLKWSKIGKLHIQVIQSVVSSVLKTVLIPFLNSQLKKGIPLPMLNGFALENAAILYAHPWVTVSTDVAFLGHSFLRQKTAYDVL* 512
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan2g1336 511 Gene3D - 48 481 - -
Lan2g1336 511 SUPERFAMILY Bactericidal permeability-increasing protein, BPI 48 260 IPR017943 GO:0008289
Lan2g1336 511 Pfam LBP / BPI / CETP family, N-terminal domain 55 228 IPR017942 GO:0008289
Lan2g1336 511 PANTHER LBP/BPI/CETP FAMILY, CARBOXY-TERMINAL DOMAIN PROTEIN 12 508 - -
Lan2g1336 511 SMART bpi2_2 294 492 IPR001124 GO:0008289
Lan2g1336 511 Pfam LBP / BPI / CETP family, C-terminal domain 296 495 IPR001124 GO:0008289
Lan2g1336 511 PANTHER OS06G0309200 PROTEIN 12 508 IPR045897 -
Lan2g1336 511 SUPERFAMILY Bactericidal permeability-increasing protein, BPI 261 495 IPR017943 GO:0008289
Lan2g1336 511 Gene3D - 54 234 - -
Lan2g1336 511 PIRSF Lipid_binding_protein 24 500 IPR030675 GO:0005615|GO:0008289
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan2g1336 Lan-Chr2 24121371 24124804 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan2g1336 K05399 - gmx:100804747 645.966
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan2g1336 2 24121371 24124804 Lan2g1336 2 24121371 24124804 ECH
Lan2g1336 2 24121371 24124804 Lan11g0059 11 350589 354797 LSH
Lan2g1336 2 24121371 24124804 Lan2g1336 2 24121371 24124804 PCT
Lan2g1336 2 24121371 24124804 Lan11g0059 11 350589 354797 PCT
Lan11g0059 11 350589 354797 Lan2g1336 2 24121371 24124804 PCT