Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan11g0059 ATGTTTACTAAATCCTCACAAGGTTCCACCCCTGAAAAATCAATGGCACCAACAATTCTTTTTCTTCTTTTATCTCCTCTGTTCATTTCAACCAATATTGTTGGTCTCAAACAGCATCATGATGATGGTTTCATCTCTGTGGTGATATCTGATAAGGGTCTTGATTTTGCAAAGGATTTTCTGATAGAACAAGCTATAGCTTCTATTGTTCCCTCTCAACTTCCAGATATTGAGAAGAAAGTGAAGGTGCCACTTGTTGGAAAGGCTCAAGTGATTCTTTCTGAGATCACAATCAAGGATATTCAAATAAACACTTCATCTGTTAAGATTGGTGAGTTGGGCATTGTTCTAGTTGTTTCAGGTGCCACTGCAGATTTGACTATGAATTGGAGGTATACTGCAAGAACTTCTTTAGTACCAATTGGAATTTCAGATAGTGGTAAAGCCACTGTGAAGGCTGAAGATCTGCAAGTGGGGCTTACTGTAAATCTCAAGAACCAAGAAGGAACTCTTAAGTTGATTCTCTTAGATTATGGATGTCATGTTGGAGATTTATCTATAAAGTTGAGTGGTGGAGCAGCCTGGCTTTACCAAGTGCTAGTAGATGCTTTTGAAGGCAATATAGCATCTGCAGTTGAAGAGGCCATTTCTAAGAAAATAAGAGAAGGGATAGCGCAGTTTGACACTTTATTGCAATCTCTTCCAAAGATGGTTTCATTTGACAAAACTTCTTTCCTAAATGTTTCATTCGTGGACAATCCTGTGCTGACTAATTCTTCTATTGAACTTGAAATAAATGGTTTATTCACTGGGAGAAGTAAAGTTTTAGTACCTCAAACTTACTACAGAGGGTCAGAGATTTCTGTTCCCCGTGGTGGCTCACCAAGGATGATAGAGATTTCAGTACATGAAAATGTTTTGAATTCCGCATCCTCAGTGTATTTTACGGCAGATAGTATGCAATGGATTGTTGACGAGATACCTGATCAGGCCCTTTTGAACACTGCTGAATGGAGATTCATTGTTCCTCAATTATACAAGCAATATCCAAATGCTGACATGAACCTTAATGTGTCTGTATCATCTGCACCAGTTATACAAGTCACCGACCAAGATGTTAAAGGTTCCATTATTCTCGTTATAGTAATTAATGTTCTTGAAGCTGGTGAAGTCATTCCGGTTGCGTGCATCTCAGTGAATATTAGTGCTTCAGTTGATGTGGAAATAGCAAGAAGCAATATTGTTGGTAGGCTTGAATTGGATAAGTTTTCCATATACTTAAAATGGAGCAAAATAGGAAAACTGCACATTCAAACAATTCAGTCATTGGTGTCAAATGTACTAAAAACAGTCCTCATACCATTCCTGAACTCAGAATTAAAGAAAGGAATAACATTGCCAATGGTTAATGGTTTTGGCCTTGAGAATGCTGGTATCTTGTATGCTCAACCATGGATTATGGTATATAGTGATGTTGCCTTCTTAAACCACTCCTATCTCACACAGAACCCATCTTATGATGCTTTATAG 1530 0.3791 MFTKSSQGSTPEKSMAPTILFLLLSPLFISTNIVGLKQHHDDGFISVVISDKGLDFAKDFLIEQAIASIVPSQLPDIEKKVKVPLVGKAQVILSEITIKDIQINTSSVKIGELGIVLVVSGATADLTMNWRYTARTSLVPIGISDSGKATVKAEDLQVGLTVNLKNQEGTLKLILLDYGCHVGDLSIKLSGGAAWLYQVLVDAFEGNIASAVEEAISKKIREGIAQFDTLLQSLPKMVSFDKTSFLNVSFVDNPVLTNSSIELEINGLFTGRSKVLVPQTYYRGSEISVPRGGSPRMIEISVHENVLNSASSVYFTADSMQWIVDEIPDQALLNTAEWRFIVPQLYKQYPNADMNLNVSVSSAPVIQVTDQDVKGSIILVIVINVLEAGEVIPVACISVNISASVDVEIARSNIVGRLELDKFSIYLKWSKIGKLHIQTIQSLVSNVLKTVLIPFLNSELKKGITLPMVNGFGLENAGILYAQPWIMVYSDVAFLNHSYLTQNPSYDAL* 510
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan11g0059 509 PANTHER OS06G0309200 PROTEIN 15 506 IPR045897 -
Lan11g0059 509 Pfam LBP / BPI / CETP family, C-terminal domain 294 492 IPR001124 GO:0008289
Lan11g0059 509 Gene3D - 46 479 - -
Lan11g0059 509 PIRSF Lipid_binding_protein 22 498 IPR030675 GO:0005615|GO:0008289
Lan11g0059 509 Pfam LBP / BPI / CETP family, N-terminal domain 53 224 IPR017942 GO:0008289
Lan11g0059 509 SUPERFAMILY Bactericidal permeability-increasing protein, BPI 259 493 IPR017943 GO:0008289
Lan11g0059 509 Gene3D - 52 232 - -
Lan11g0059 509 SMART bpi1_3 49 274 IPR017942 GO:0008289
Lan11g0059 509 SMART bpi2_2 292 497 IPR001124 GO:0008289
Lan11g0059 509 SUPERFAMILY Bactericidal permeability-increasing protein, BPI 46 258 IPR017943 GO:0008289
Lan11g0059 509 PANTHER LBP/BPI/CETP FAMILY, CARBOXY-TERMINAL DOMAIN PROTEIN 15 506 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan11g0059 Lan-Chr11 350589 354797 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan11g0059 K05399 - gmx:100804747 663.299
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan2g1336 2 24121371 24124804 Lan11g0059 11 350589 354797 LSH
Lan2g1336 2 24121371 24124804 Lan11g0059 11 350589 354797 PCT
Lan11g0059 11 350589 354797 Lan2g1336 2 24121371 24124804 PCT