Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan2g1335 ATGGCGAACGATAACGAACCCGCGAAGCTTCTGTTACCGTACCTTCAACGCGCCGATGAATTGCAAAAGCACGAACCTCTCGTCGCTTATTACTGTCGATTATATGCGATGGAACGAGGATTGAAGATTCCACAGAGTGAACGCACCAAGACCACTAATGCTCTTCTTGTTTCTCTTATGAAACAACTTGAAAAGGATAAAAAGTCCACTCAGCTAGTGCCTGAAGATAATTTATATGTTGAGGGATTTGCTTTGAATGTGTTTGGAAAAGCAGACAAGCAAGATCGTGCTGGAAGAGCTGATTTAAATACAGCAAAAACATTTTATGCTGCTAGCATCTTTTTTGAGATTCTTAATCAATTTGGAGCGCTTCAGCCTGATCTGGAACAGAAACAGAAATATGCAGTCTGGAAAGCAGCAGATATAAGAAAGGCTTTGAAAGAAGGAAGGAGGCCTATCGCCGGCCCACCTAATGGTGACGAGGATCTGTCAGTTCCTTCGAGTACTCCTAGTAATAGATATGATCTCGGGACTAATGAAACCACTGTTACCAGCTCTGGACCAGAATCTGATCTTTCAACTAATTATCATAACCCTGTCAACTACCAGAATCTGCCAAGCACTCATCCTGTACCTAAATTCCATGATACTGTTAATGACAATCATCCTACAAACATTCCACCATCTATGCAGTTTCATGAGGGAGTAAATAATAATAAGCATTCTTCCGATGTTTCTCCATCATCACACCCTTATGCATCTGCAGGTTATCCTTCCCAAGACTACCCGTCTTTCCAGGACTACCATCCTCCTCCACCTTCCCAAGACTACCATCCTCCTCCACCTTCCCAAGACTTCCAGCCTCGTCCACCTTCCCAAGATTACCAGCCCCCTCCACCTTCCCAAGATTACCAGCCCCCTCCACCTTCCCAAGATTATCATTCTCCTCCATCTTCCCAAGATTACCATCCTCCTCCGCCTATGAGATCAGAAACTTCTTATCCTGAGCCCTACACCCATCAGCAGTACTCACCAAAGAGTTCACAGCATTTAGGTCCTAACTACCCGTCTCATGAAACTTCCTCTTACCCCAATTTTCAGTCGTATCCAAGTTTTACCGAAAGCAGCCTACCATCCGTCCCATCAAATTATATGTATTATCAAAGTTCTGATCCTTCATTCTCTTCCCAGTCAGCTCCACTTACTACAAACCATCCATCAAGTGTCCAACACAGTTCCAGCAGCAGAAACGGAGTTGTCTTGGAACCTGCCCCAACTGCTCCGACATACCAGTATGACAGTAACTACCAGCCAACACCTGAAAAAATAGCCGAGGCACACAAGGCTGCAAGATTTGCTGTTGGGGCCCTGGCATTCGATGATGTGTCCATTGCAGTTGACTACCTAAAGAAATCACTTGAGTTGCTTACAAAACCATCAGCTGGTCAGTGA 1452 0.4477 MANDNEPAKLLLPYLQRADELQKHEPLVAYYCRLYAMERGLKIPQSERTKTTNALLVSLMKQLEKDKKSTQLVPEDNLYVEGFALNVFGKADKQDRAGRADLNTAKTFYAASIFFEILNQFGALQPDLEQKQKYAVWKAADIRKALKEGRRPIAGPPNGDEDLSVPSSTPSNRYDLGTNETTVTSSGPESDLSTNYHNPVNYQNLPSTHPVPKFHDTVNDNHPTNIPPSMQFHEGVNNNKHSSDVSPSSHPYASAGYPSQDYPSFQDYHPPPPSQDYHPPPPSQDFQPRPPSQDYQPPPPSQDYQPPPPSQDYHSPPSSQDYHPPPPMRSETSYPEPYTHQQYSPKSSQHLGPNYPSHETSSYPNFQSYPSFTESSLPSVPSNYMYYQSSDPSFSSQSAPLTTNHPSSVQHSSSSRNGVVLEPAPTAPTYQYDSNYQPTPEKIAEAHKAARFAVGALAFDDVSIAVDYLKKSLELLTKPSAGQ* 484
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan2g1335 483 MobiDBLite consensus disorder prediction 381 420 - -
Lan2g1335 483 Gene3D - 5 152 IPR023175 -
Lan2g1335 483 MobiDBLite consensus disorder prediction 148 362 - -
Lan2g1335 483 MobiDBLite consensus disorder prediction 162 210 - -
Lan2g1335 483 PANTHER VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN VTA1 HOMOLOG 298 481 IPR044538 GO:0032511
Lan2g1335 483 PANTHER VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN VTA1 HOMOLOG 1 320 IPR044538 GO:0032511
Lan2g1335 483 MobiDBLite consensus disorder prediction 381 438 - -
Lan2g1335 483 MobiDBLite consensus disorder prediction 334 362 - -
Lan2g1335 483 Gene3D Immunoglobulin FC, subunit C 439 478 - -
Lan2g1335 483 Pfam Vta1 like 13 148 IPR039431 -
Lan2g1335 483 MobiDBLite consensus disorder prediction 218 261 - -
Lan2g1335 483 Pfam Vta1 C-terminal domain 440 477 IPR041212 -
Lan2g1335 483 MobiDBLite consensus disorder prediction 265 332 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan2g1335 Lan-Chr2 24117606 24120997 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan2g1335 7 118 Glycosyltransferase AT1G05570 25.000 4.09e-07 50.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan2g1335 K12199 - gmx:100783739 745.732
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan2g1335 2 24117606 24120997 Lan2g1335 2 24117606 24120997 ECH
Lan2g1335 2 24117606 24120997 Lan11g0062 11 370864 373804 LSH