Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan2g1327 ATGGCTTCCCTCACCTTCACATTTTTCCTTATGCTCATCTCACTCTCTGCTTCTCTATCAGAAGCGGGTGGTTCTATCGGAGTAAACTATGGAAGGGTAGCGAACGACCTACCTCCGCCGTCAAAGGTGGTGGAGCTGCTCAAAAACCAGGGTCTCAACCGTGTTAAACTCTACGACACCGACGCCAATGTACTCACAGCGTTCGCCAACTCAGGAATCAAAGTAGTAGTAGCAATGCCCAACGAGCTTCTCTCCTCCGCCGCCGCCGACCAATCCTTCACCGACGCATGGGTCAAAGCTAACATCTCAACCTTCCACCCCGCCACCCAAATCGAAGCCATCGCCGTCGGTAACGAAGTTTTCGCCAACTCAAACACCACCACCAAATTTCTCGTCCCAGCCATGAACAATGTCTACGCTTCTTTAACGAAACTCAATTTAGACAAAGATATTAAAATATCTTCACCTATTGCACTATCAGCGTTAGAAACCTCGTTCCCAATTTCATCCGGTTCATTTAAACCGGACCTTGTCGAACCGGTTATTGAACCCATGCTTAATTTCCTTCGCCGAACCGGTTCTTATCTTATGGTAAACGCTTACCCTTTTTTCGCTTATTCTGATAACTCGGATCAAATTTCTCTTGATTACGCACTCTTTAAACAAAACCCTGGTGTCGTTGATTCGGGTAACGGTTTACGTTATATGAATTTGTTAGATGCTCAAATCGACGCTGTTTATGCTGCCATGTCAGCACTGAATTACAACGACGTTAAAATCACCGTTACGGAAACCGGTTGGCCGTCAAAGGGGGACTCTAATGAAATTGGAGCTGGTGAAGACAATGCGGCGTCGTATAATGGGAATTTAGTTAAACGTGTTTTGACTGAGACTGGGACTCCGTTAAGGCCCAATGACACGCTAACAGTGTTTCTGTTTGCGTTGTTTAACGAGAACCAGAAGCCCGGGCCCACATCTGAACGTAACTACGGGCTTTTCTACCCTAGCGAAGAGAAGGTGTATGATATTCCGTTAACTTTGACGGAGGTGAATGTTAATTCGTCTGGTGTAGGGAAGAGTCAGGTACCAGTGAATGGGAATAATGGTTCAACGACGTCGTATAATGGAGAAACATGGTGTGTAGCGAGTGGTAATGTTGGGAAAGAGAAATTACAGGGTGCACTTGATTATGCATGTGGTGAAGGTGGAGCTGATTGCACCCCGATCCAAGAGGGTGCCACGTGTTATAATCCTAACACTTTGGAGGCACATGCTTCATATGCTTTCAATAGTTACTATCAGAAGAACTCACGTGCTTCTGGTACCTGTTATTTTGCTGGTGCTGCCTACGTAGTTACACATCCTCCTAAGTATGGGAAGTGCGAATTCCCCACGGGTTATTGA 1404 0.4608 MASLTFTFFLMLISLSASLSEAGGSIGVNYGRVANDLPPPSKVVELLKNQGLNRVKLYDTDANVLTAFANSGIKVVVAMPNELLSSAAADQSFTDAWVKANISTFHPATQIEAIAVGNEVFANSNTTTKFLVPAMNNVYASLTKLNLDKDIKISSPIALSALETSFPISSGSFKPDLVEPVIEPMLNFLRRTGSYLMVNAYPFFAYSDNSDQISLDYALFKQNPGVVDSGNGLRYMNLLDAQIDAVYAAMSALNYNDVKITVTETGWPSKGDSNEIGAGEDNAASYNGNLVKRVLTETGTPLRPNDTLTVFLFALFNENQKPGPTSERNYGLFYPSEEKVYDIPLTLTEVNVNSSGVGKSQVPVNGNNGSTTSYNGETWCVASGNVGKEKLQGALDYACGEGGADCTPIQEGATCYNPNTLEAHASYAFNSYYQKNSRASGTCYFAGAAYVVTHPPKYGKCEFPTGY* 468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan2g1327 467 PANTHER O-GLYCOSYL HYDROLASES FAMILY 17 PROTEIN 6 460 - -
Lan2g1327 467 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATED 6 460 IPR044965 GO:0004553|GO:0005975
Lan2g1327 467 Pfam Glycosyl hydrolases family 17 26 343 IPR000490 GO:0004553|GO:0005975
Lan2g1327 467 SUPERFAMILY (Trans)glycosidases 26 343 IPR017853 -
Lan2g1327 467 SMART X8_cls 378 463 IPR012946 -
Lan2g1327 467 Gene3D Glycosidases 24 352 - -
Lan2g1327 467 Pfam X8 domain 378 449 IPR012946 -
Lan2g1327 467 Gene3D - 372 463 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan2g1327 Lan-Chr2 24073126 24075452 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan2g1327 24 467 Glycoside Hydrolase AT4G26830 68.764 0.0 637
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan2g1327 - - gmx:100803406 728.013
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan2g1327 2 24073126 24075452 Lan2g1327 2 24073126 24075452 ECH
Lan2g1327 2 24073126 24075452 Lan11g0069 11 403552 405992 LSH