Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan11g0069 ATGTTCTGCTTCTTTCATAAACAGCACACTATGGCATCATTCGCCTTATATATCTTCCTCATGCTCATCTCACTCTTTGTTCCTTCATCAGAAGCGAGTGGTTCAATCGGAATAAACTATGGAAGGGTGGCGAACGACCTACCTTCGCCGTCAAAGGTGGTGGAGCTCCTCAAAACCGAGGGCCTGAACCGTGTGAAGCTCTACGACACCGACGCCAATGTAGTAACCGCTTTCGCCAACACATCCATCAAAGTAATAGTAGCCATGCCGAACGAGCTCCTCTCCTCCTCCGCCGCCAATCAATCCTTCACCGACGCGTGGGTCAAAGCTAACATCTCCGGCTACCACCCCGCCACCGAAATTGAAGCCATCGCCGTTGGCAACGAAGTCTTCGCCAACAACTACACCAATTACCTCGTTCCCGCCATGAAGAACGTTCACGCCTCTTTAACAAAATTCAATTTACACAAAGACATTAAAATCTCTTCACCCATCGCACTCTCAGCGTTAGAAACCTCTTACCCAGTTTCATCCGGTTCATTTAAACCGGAACTGGTCGAACCGGTTATTAAACCCATGCTCGAGTTCCTTCGCCGAACCGGATCTTATCTGATGATAAACGCATATCCTTTTTTCGCATATTCCGCAAACTCAGATAAAATATCTCTCGATTACGCACTCTTTAAAGAAAACCCTGGCGTCGTTGATTCTGGTAACGGTTTCCGTTATACGAATTTGTTGGATGCTCAAATCGACGCCGTTTATGCTGCCATGTCAGCACTCAAATACGACGACGTTAACGTTACCGTAACAGAAACCGGTTGGCCATCGAAAGGGGATTCTAACGAGATTGGAGCTGGTGAAGACAATGCGGCGTCGTATAATGGAAACTTAGTTAAACGTGTTTTGACGGGGCGTGGGACGCCGTTAAGGCCCAATGATTCACTCAACGTGTTTCTCTTTGCGTTATTTAACGAGAACCAAAAGCCTGGGCCCACATCTGAACGGAACTATGGGTTGTTCTATCCGAGTGAACAAAAGGTTTATGATATTCCGTTAACTTTGACGGAGGCTAATGTTAATTCTTCTGGTGTTGGGAAGAGAGAGGTTCCGGTGAATGGGAATAATGGTTCAACGACGTCGTTTAGTGGAGAGAGTTGGTGCGTAGCGAGTGGTGATGTTGGGAAAGAGAAATTGCAGGGTGCACTGGATTATGCATGTGGTGAGGGTGGAGCTGATTGTACCCCGATTCAGAATGGTGCCACGTGTTATAATCCTAACACTTTGGAGGCACATGCTTCATATGCTTTCAACAGTTACTATCAGAAAAACTCACGTGCGTCTGGATCCTGTGATTTTGGTGGTGCTGCTTATGTTGTTACTCAACCTCCTAAGTATGGGAAGTGCGAATTCCCCACAGGTTACTGA 1428 0.4678 MFCFFHKQHTMASFALYIFLMLISLFVPSSEASGSIGINYGRVANDLPSPSKVVELLKTEGLNRVKLYDTDANVVTAFANTSIKVIVAMPNELLSSSAANQSFTDAWVKANISGYHPATEIEAIAVGNEVFANNYTNYLVPAMKNVHASLTKFNLHKDIKISSPIALSALETSYPVSSGSFKPELVEPVIKPMLEFLRRTGSYLMINAYPFFAYSANSDKISLDYALFKENPGVVDSGNGFRYTNLLDAQIDAVYAAMSALKYDDVNVTVTETGWPSKGDSNEIGAGEDNAASYNGNLVKRVLTGRGTPLRPNDSLNVFLFALFNENQKPGPTSERNYGLFYPSEQKVYDIPLTLTEANVNSSGVGKREVPVNGNNGSTTSFSGESWCVASGDVGKEKLQGALDYACGEGGADCTPIQNGATCYNPNTLEAHASYAFNSYYQKNSRASGSCDFGGAAYVVTQPPKYGKCEFPTGY* 476
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan11g0069 475 SUPERFAMILY (Trans)glycosidases 36 351 IPR017853 -
Lan11g0069 475 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATED 21 468 IPR044965 GO:0004553|GO:0005975
Lan11g0069 475 Gene3D Glycosidases 34 360 - -
Lan11g0069 475 PANTHER O-GLYCOSYL HYDROLASES FAMILY 17 PROTEIN 21 468 - -
Lan11g0069 475 Pfam Glycosyl hydrolases family 17 36 351 IPR000490 GO:0004553|GO:0005975
Lan11g0069 475 Pfam X8 domain 387 457 IPR012946 -
Lan11g0069 475 SMART X8_cls 386 471 IPR012946 -
Lan11g0069 475 Gene3D - 380 471 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan11g0069 Lan-Chr11 403552 405992 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan11g0069 30 475 Glycoside Hydrolase AT4G26830 69.866 0.0 650
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan11g0069 - - gmx:100803406 735.717
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan2g1327 2 24073126 24075452 Lan11g0069 11 403552 405992 LSH