Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan2g1139 ATGGGCACCTTCACATACAACTACAAAATGTTCAAGTGCTTCAACAGAAAATATGCCATCACCGATCAATCTCCACCACCGGACGTTAAGGATGTTTTCTCCACCTTCTCCGACGGTGCTACCTCCATCTCTGCTGAAAAACTACGGTGGTTCCTTGTGGACCACCAAGGTGAACTAGAATGTACCACACAGGATTCTGAATGTATCATTGATAATGTTCTTCGATCTCTGAAACGGATTCAGGAAAAGGAAAATGATTCTGGTGTCATTTCTGAATCTGATAATGGGGTTCACCAGGGACTCACTCTTGATGATTTTTTTCATTTTTTGTTTCTTGATGATTTCAATGGCCCCCTTAAATCACAGGTACATCATGACATGAATGCACCATTATCACATTATTTCATATATACAGGGCACAATTCCTATCTCACTGGAAATCAGCTGAGCAGTGATTGCAGTGATGTGCCCATCATAAAGGCTCTGCAACGTGGCGTGCGAGTTATCGAACTTGATCTATGGCCTAATTCAACCAGAGATGATATTGATGTAGTTCATGGAAGGACACTTACCACTCCTGTTTCACTCACCCAATGTTTGAAGTCTATAAAAGAGTATGCTTTTGTTAAATCTGAATACCCAGTCATTATAACCTTAGAAGATCACCTTACACCAGATCTTCAAGCTAAAGTTGCTGAGATGACAACTCAAATATTTGGAGAAATGCTACATTATCCTCAGACAGATACTAGGGTGGAATTCCCTACACCAGAGTCGTTAAAATGCCGAATTCTTATATCGACCAAACAACCAAAAGAATATCTTGAATGCAAGCAATTTAAGGACAAGGAGATTGAAAGAGAATTGGCTGATGAAGGATCATCATCTCCAAGCCATTCTACTGATGTTGAATCTGAAGAAAAGTGCAATGGAAGTGATCTCGACGATCAAGAAGATTCGATTGCACTTGATAAGAAAACAGACCAGCAAGGTAGCACACCTGAGTACAAACGTTTGATTACAATCCATGCTGGAAAACCAAAGGGTCATATAAAAGATAGCTTAAAAGTTGTTGGGAGTGTTAAGCGCTTGAGCTTGAGTGAGCAAGAACTTGAAAGAGCTTCTGTCTCTCATGGACCTGACATTGTTAGGTTTACACAGAAGAATATTCTCAGGGTGTATCCGAAGGGAACACGTGTCAACTCGTCGAATTACAGGCCACATATTGGGTGGATGTATGGAGCTCAGATGGTTGCATTAAACATGCAGGGATATGGGAGATCACTGTGGTTCATGGAAGGGATGTTTAGATCAAATGGAGGTTGTGGTTATGTGAAAAAGCCTGCATTTCTATTGGAAAGAGATGCACAAGATGAGACTTTTGATCCGAAAAGAACATTGCCAGTGAAGAAAACATTAAAGGTAAAAGTATATATGGGAAATGGGTGGAGCTCAGATTTCAGCAAAACACACTTTGATGCGTTCTCTCCACCAGATTTTTACACAAAGGTTTGTATTGTTGGAGTACCAGCTGATAGAGCGAATAAGAAAACAAAGATAATTCCAGATAATTGGTTTCCTGTATGGGATGAAGAGTTTGAATTTCCATTGAGTGTTCCAGAACTAGCTTTGCTCAGAATAGAAGTTCGAGAATATGATAAACACGAAAAGGATGACTTTGGTGGCCAAACATGTTTACCAATCTCTGAACTTAGACCTGGGTTTCGTTCTGTCCCTCTATATGATCAAAAGGGTGAGAAATTAAAATCTGTAAAGCTTCTAATGCGGTTTCAGTTTAGATGA 1803 0.3993 MGTFTYNYKMFKCFNRKYAITDQSPPPDVKDVFSTFSDGATSISAEKLRWFLVDHQGELECTTQDSECIIDNVLRSLKRIQEKENDSGVISESDNGVHQGLTLDDFFHFLFLDDFNGPLKSQVHHDMNAPLSHYFIYTGHNSYLTGNQLSSDCSDVPIIKALQRGVRVIELDLWPNSTRDDIDVVHGRTLTTPVSLTQCLKSIKEYAFVKSEYPVIITLEDHLTPDLQAKVAEMTTQIFGEMLHYPQTDTRVEFPTPESLKCRILISTKQPKEYLECKQFKDKEIERELADEGSSSPSHSTDVESEEKCNGSDLDDQEDSIALDKKTDQQGSTPEYKRLITIHAGKPKGHIKDSLKVVGSVKRLSLSEQELERASVSHGPDIVRFTQKNILRVYPKGTRVNSSNYRPHIGWMYGAQMVALNMQGYGRSLWFMEGMFRSNGGCGYVKKPAFLLERDAQDETFDPKRTLPVKKTLKVKVYMGNGWSSDFSKTHFDAFSPPDFYTKVCIVGVPADRANKKTKIIPDNWFPVWDEEFEFPLSVPELALLRIEVREYDKHEKDDFGGQTCLPISELRPGFRSVPLYDQKGEKLKSVKLLMRFQFR* 601
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan2g1139 600 Gene3D - 24 117 - -
Lan2g1139 600 Pfam C2 domain 472 573 IPR000008 -
Lan2g1139 600 PANTHER PHOSPHOINOSITIDE-SPECIFIC PHOSPHOLIPASE C FAMILY PROTEIN 6 599 IPR001192 GO:0035556
Lan2g1139 600 ProSiteProfiles C2 domain profile. 453 582 IPR000008 -
Lan2g1139 600 ProSiteProfiles Phosphatidylinositol-specific phospholipase X-box domain profile. 125 269 - -
Lan2g1139 600 Gene3D Phosphatidylinositol (PI) phosphodiesterase 121 465 IPR017946 GO:0006629|GO:0008081
Lan2g1139 600 PANTHER PHOSPHOINOSITIDE PHOSPHOLIPASE C 6 6 599 - -
Lan2g1139 600 Pfam Phosphatidylinositol-specific phospholipase C, Y domain 364 450 IPR001711 GO:0004435|GO:0006629|GO:0007165|GO:0035556
Lan2g1139 600 MobiDBLite consensus disorder prediction 286 317 - -
Lan2g1139 600 Gene3D C2 domain 467 600 IPR035892 -
Lan2g1139 600 SMART plcy_3 336 452 IPR001711 GO:0004435|GO:0006629|GO:0007165|GO:0035556
Lan2g1139 600 ProSiteProfiles Phosphatidylinositol-specific phospholipase Y-box domain profile. 365 451 IPR001711 GO:0004435|GO:0006629|GO:0007165|GO:0035556
Lan2g1139 600 MobiDBLite consensus disorder prediction 301 317 - -
Lan2g1139 600 SMART C2_3c 472 580 IPR000008 -
Lan2g1139 600 CDD C2_PLC_like 470 600 - -
Lan2g1139 600 Pfam Phosphatidylinositol-specific phospholipase C, X domain 127 269 IPR000909 -
Lan2g1139 600 PRINTS Phospholipase C signature 130 148 IPR001192 GO:0035556
Lan2g1139 600 PRINTS Phospholipase C signature 156 176 IPR001192 GO:0035556
Lan2g1139 600 PRINTS Phospholipase C signature 253 270 IPR001192 GO:0035556
Lan2g1139 600 PRINTS Phospholipase C signature 390 411 IPR001192 GO:0035556
Lan2g1139 600 PRINTS Phospholipase C signature 411 429 IPR001192 GO:0035556
Lan2g1139 600 PRINTS Phospholipase C signature 566 576 IPR001192 GO:0035556
Lan2g1139 600 SUPERFAMILY PLC-like phosphodiesterases 125 453 IPR017946 GO:0006629|GO:0008081
Lan2g1139 600 SMART plcx_3 125 269 IPR000909 -
Lan2g1139 600 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 472 599 IPR035892 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan2g1139 Lan-Chr2 22641800 22645812 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan2g1139 5 599 Acyl Lipid Metabolism Gene Families AT2G40116 61.011 0.0 758
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan2g1139 K05857 - gmx:100777010 896.345
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan15g0116 15 826242 829936 Lan2g1139 2 22641800 22645812 PCT
Lan2g1139 2 22641800 22645812 Lan15g0116 15 826242 829936 PCT