Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan15g0116 ATGAGTATGAAAATGAAAGTGAAGGTTCATAAGTACAAGGTGTTAAATTTCTTGACCAGAAAGTTTGAAGTGCACAAGACAGAACCACCTTTGGATATTAAGAAAACATTCTTAAAGTTTGCTAATGGTGGAAACCTTATGTTTAATGATCAGCTTCTTCAGTTCATGATGGAGTACCAAGGTGAAAAAAACTGCACCATAAAAGATTTGGAGCCAATTATAGAGAAGATTTTGCATGAAGGAAATTCTACATGTAATGCAGAAGGGTGTAAAGGACAAGGACTTAGTCTCAATGATTTCATCAATTTTCTGCTCCTTCATGATTTCAATGGTCCCTTGAAAAATGAGGTGCATCATGATATGAGTGCTCCATTGTCACATTATTTCATGTATACAGGACACAATTCTTACCTGACCGGGAATCAACTTACCAGCGAATGCAGCGACGAGCCGATTATAGAGGCTTTGCTACATGGCGTACGCGTAATCGAACTAGATTTATGGCCTGCTTCAAGTAAAGATGGTATCAAAGTAGTTCATGGAAGGACTCTAACCACTCCAGTGTCACTAATCAAATGTCTTGAATCCATAAAGAAATATGCTTTTATCAAATCTGATTTTCCAGTGATTCTAACTTTGGAAGACCACTTAACATCAACACTTCAAGCTAAATTTGCAGAAATAGCAACTGAAATATTTGGAGATATGCTACATTGTCCTCAGACAGATTGTTTGACAGAATTCCCCTCACCGGAATCGTTGAAAAAGCAAGTAGTTATATCAACCAAACTACCTAAAGAAGATCCTCAAAATGAAGAAGAATTATGTGGAAAAGCATTGTTAGATTCTATGGTTAAACTGAAAACTGAGTACCTGAATGAAAGTTATGAAGATGAGGAAGATATAAGCACTAAAAAACCGAACCTGCGAGGCGCAGTTCAATACAAACACTTGATTACAATCCATGGTGTGAAATCTAAAGGTACTATTAAGGAACTACTGAAAGTTGATGGTAAAGTTAGAAGGCTAAGTTTGAGTGAGAAGAAACTCAAAAGTGCTTCCGAATCTCATGGAACTGATATTATTAGGTTCACACGGGAAAATATTCTTCGGGTCTTTCCTAACGGAGAACGCGTCAAATCCTCAAATTTTAGGCCACATTTAGGGTGGATGTATGGAGCTCAGATGGTGGCATTCAATATTCAGGGGCATGGAAAACCACTTTGGTATCAACAAGGAATGTTCAGAGCAAATGGAGGGTGTGGTTATGTAAAAAAGCCTGAGTTTCTGTTGTGTAAACAATCAGATAAGGACGAGTTTGATCCGAAAAGAACTTCGCCAGTGAAGAAGATATTAAAGGTAAAAGTATACAATGGTGAAGGTTGGAAATCAGATTTCAGTTCAACACACTTTGATCTATTCTCTCCACCAGATTTTTACACTAAGGTTTGTATTGTTGGAGTGCCAGCTGATTCTGTCAAGAAGCATACAAGTGTAGTCATGAACAAATGGTTTCCTGTATGGGATGAAGAGTTTGAATTCCCTTTGACAGTTCCGAAACTCGCTTTGCTTCGGATACAAGTAAAGGACAAAGATAAGGGAGGAAAAGATGACTTTGCAGGGCAGAATTGTTTACCAGTGCCAGAGCTAAGACACGGATTTCGATCCGTCCCTCTATATGACAAAAGGGGGAAGAAATATGAATCTGTGAAGCTTTTGATGAGGTTTCAGCTTGAAAATGTTGAATAA 1749 0.3796 MSMKMKVKVHKYKVLNFLTRKFEVHKTEPPLDIKKTFLKFANGGNLMFNDQLLQFMMEYQGEKNCTIKDLEPIIEKILHEGNSTCNAEGCKGQGLSLNDFINFLLLHDFNGPLKNEVHHDMSAPLSHYFMYTGHNSYLTGNQLTSECSDEPIIEALLHGVRVIELDLWPASSKDGIKVVHGRTLTTPVSLIKCLESIKKYAFIKSDFPVILTLEDHLTSTLQAKFAEIATEIFGDMLHCPQTDCLTEFPSPESLKKQVVISTKLPKEDPQNEEELCGKALLDSMVKLKTEYLNESYEDEEDISTKKPNLRGAVQYKHLITIHGVKSKGTIKELLKVDGKVRRLSLSEKKLKSASESHGTDIIRFTRENILRVFPNGERVKSSNFRPHLGWMYGAQMVAFNIQGHGKPLWYQQGMFRANGGCGYVKKPEFLLCKQSDKDEFDPKRTSPVKKILKVKVYNGEGWKSDFSSTHFDLFSPPDFYTKVCIVGVPADSVKKHTSVVMNKWFPVWDEEFEFPLTVPKLALLRIQVKDKDKGGKDDFAGQNCLPVPELRHGFRSVPLYDKRGKKYESVKLLMRFQLENVE* 583
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan15g0116 582 Gene3D Phosphatidylinositol (PI) phosphodiesterase 116 443 IPR017946 GO:0006629|GO:0008081
Lan15g0116 582 ProSiteProfiles Phosphatidylinositol-specific phospholipase X-box domain profile. 119 263 - -
Lan15g0116 582 Gene3D - 28 111 - -
Lan15g0116 582 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 447 578 IPR035892 -
Lan15g0116 582 Gene3D C2 domain 446 582 IPR035892 -
Lan15g0116 582 SMART C2_3c 451 559 IPR000008 -
Lan15g0116 582 PANTHER PHOSPHOINOSITIDE-SPECIFIC PHOSPHOLIPASE C FAMILY PROTEIN 11 581 IPR001192 GO:0035556
Lan15g0116 582 SUPERFAMILY PLC-like phosphodiesterases 119 431 IPR017946 GO:0006629|GO:0008081
Lan15g0116 582 Pfam C2 domain 451 551 IPR000008 -
Lan15g0116 582 PANTHER PHOSPHOINOSITIDE PHOSPHOLIPASE C 11 581 - -
Lan15g0116 582 CDD C2_PLC_like 449 579 - -
Lan15g0116 582 SUPERFAMILY EF-hand 29 121 IPR011992 -
Lan15g0116 582 SMART plcx_3 119 263 IPR000909 -
Lan15g0116 582 PRINTS Phospholipase C signature 124 142 IPR001192 GO:0035556
Lan15g0116 582 PRINTS Phospholipase C signature 150 170 IPR001192 GO:0035556
Lan15g0116 582 PRINTS Phospholipase C signature 247 264 IPR001192 GO:0035556
Lan15g0116 582 PRINTS Phospholipase C signature 369 390 IPR001192 GO:0035556
Lan15g0116 582 PRINTS Phospholipase C signature 390 408 IPR001192 GO:0035556
Lan15g0116 582 PRINTS Phospholipase C signature 545 555 IPR001192 GO:0035556
Lan15g0116 582 ProSiteProfiles C2 domain profile. 434 561 IPR000008 -
Lan15g0116 582 Pfam Phosphatidylinositol-specific phospholipase C, X domain 121 263 IPR000909 -
Lan15g0116 582 Pfam Phosphatidylinositol-specific phospholipase C, Y domain 341 429 IPR001711 GO:0004435|GO:0006629|GO:0007165|GO:0035556
Lan15g0116 582 SMART plcy_3 315 431 IPR001711 GO:0004435|GO:0006629|GO:0007165|GO:0035556
Lan15g0116 582 ProSiteProfiles Phosphatidylinositol-specific phospholipase Y-box domain profile. 344 430 IPR001711 GO:0004435|GO:0006629|GO:0007165|GO:0035556
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan15g0116 Lan-Chr15 826242 829936 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan15g0116 10 579 Acyl Lipid Metabolism Gene Families AT2G40116 50.987 0.0 609
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan15g0116 K05857 - gmx:100803435 773.081
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan15g0116 15 826242 829936 Lan2g1139 2 22641800 22645812 PCT
Lan2g1139 2 22641800 22645812 Lan15g0116 15 826242 829936 PCT