Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan2g0739 ATGGAAGGAAAACCAAAACATTCTTTCCTTTTCTCCTTATTCACCATTTTCCTCTCTCTCTCCACCGCTTCTACTCACTTTCAAACCCAAACCCTAACCCTCCGCTCACTCCCCAACCCACCCACTCTCTCACAACCCGAATCCGAATCCACAGAACCTGACTCGGATTCCTCAACCACCCTCTCACTCGATCTCCACCACATAGACGCACTTTCCTTCAACAAAACCCCACTCCACCTCTTCAATCTCAGGCTCCAACGTGATGCTGCAAGAGTCATTTCCTTCTCTTCCATTCTCTCAAAAGCCACTTCCCAAAACAAAACAAAACCCACCGGGTCATTTACCGGGTCGGGTTTCAGCAGTTCAGTTACTTCCGGTTTATCCCAAGGAAGCGGTGAATACTTCACGCGCCTCGGAGTAGGAACTCCTCCGAAGTATATCTACATGGTTCTTGACACAGGAAGCGACGTCGTTTGGCTCCAATGCAAACCCTGCAGGAGATGTTACTCTCAATCCGACCCGATTTTCGACCCGGCCCGATCAACCTCCTTCGCCGGAATCCCTTGCGGTTCTCCACTCTGCCGCCGTTTGGATTCTCCGGGATGCAACCAGAAGAAGGTTTGCCAGTACCAGGTCTCATACGGCGACGGTTCTTTCACGTTTGGTGATTTTTCTAACGAAACGCTGACGTTTCGACGCACTGGTGTGGCGCGCGTGGCTATCGGTTGCGGCCATGATAATGAAGGATTATTCGTTGGTGCCGCCGGTTTATTAGGTCTTGGAAGGGGAGGTCTTTCTTTTCCTTCTCAAACCGGAACCCGGTTTAATAAAAAATTCTCTTACTGTTTAGTGGACCGGTCTAGTTCAACTAAACCGTCTTCTATGGTTTTTGGCGAATCAGCTGTTTCGCGAACCGCCCGCTTCACTCCATTAATAAAAAACCCGAAGCTTGATACCTTCTATTACGTGGAGCTTCTTGGGATAAGTGTGGGTGGCACTCCGGTTCGCGGAATTTCGGCTTCTTTATTTCGGCTCGACCAGACCGGGAACGGTGGTGTAATTATTGACTCGGGTACTTCAGTGACCCGGCTCACACGACCAGCTTACGTTGCATTAAGAGACGCTTTTCGGGTCGGGGCGACCCGGTTGAAACGGGCACCCGAGTTCTCACTTTTTGATTCTTGTTATGATCTTTCGGGGCTGACGGAGGTGAAGGTTCCGACTGTAGTGTTTCACTTTCGCGGCGCTGATGTGTCGTTGCCTGCAGCGAATTACTTGATTCCGGTGGATAACAGCGGTAGCTTCTGCTTCGCGTTCGCTGGAACGATGAGTGGGTTGTCCATTATTGGGAATATCCAGCAGCAAGGGTTCCGGGTCGTGTATGACTTGGCGAGTTCACGGGTCGGGTTTTCTCCGCGAGGGTGTTAA 1428 0.5077 MEGKPKHSFLFSLFTIFLSLSTASTHFQTQTLTLRSLPNPPTLSQPESESTEPDSDSSTTLSLDLHHIDALSFNKTPLHLFNLRLQRDAARVISFSSILSKATSQNKTKPTGSFTGSGFSSSVTSGLSQGSGEYFTRLGVGTPPKYIYMVLDTGSDVVWLQCKPCRRCYSQSDPIFDPARSTSFAGIPCGSPLCRRLDSPGCNQKKVCQYQVSYGDGSFTFGDFSNETLTFRRTGVARVAIGCGHDNEGLFVGAAGLLGLGRGGLSFPSQTGTRFNKKFSYCLVDRSSSTKPSSMVFGESAVSRTARFTPLIKNPKLDTFYYVELLGISVGGTPVRGISASLFRLDQTGNGGVIIDSGTSVTRLTRPAYVALRDAFRVGATRLKRAPEFSLFDSCYDLSGLTEVKVPTVVFHFRGADVSLPAANYLIPVDNSGSFCFAFAGTMSGLSIIGNIQQQGFRVVYDLASSRVGFSPRGC* 476
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan2g0739 475 PRINTS Pepsin (A1) aspartic protease family signature 140 160 IPR001461 GO:0004190|GO:0006508
Lan2g0739 475 PRINTS Pepsin (A1) aspartic protease family signature 353 364 IPR001461 GO:0004190|GO:0006508
Lan2g0739 475 PRINTS Pepsin (A1) aspartic protease family signature 447 462 IPR001461 GO:0004190|GO:0006508
Lan2g0739 475 ProSiteProfiles Peptidase family A1 domain profile. 134 471 IPR033121 -
Lan2g0739 475 CDD cnd41_like 133 475 IPR033873 -
Lan2g0739 475 Pfam Xylanase inhibitor C-terminal 321 471 IPR032799 -
Lan2g0739 475 ProSitePatterns Eukaryotic and viral aspartyl proteases active site. 353 364 IPR001969 GO:0004190|GO:0006508
Lan2g0739 475 MobiDBLite consensus disorder prediction 35 60 - -
Lan2g0739 475 PANTHER EUKARYOTIC ASPARTYL PROTEASE FAMILY PROTEIN 12 475 - -
Lan2g0739 475 Pfam Xylanase inhibitor N-terminal 134 298 IPR032861 -
Lan2g0739 475 PANTHER ASPARTYL PROTEASES 12 475 IPR001461 GO:0004190|GO:0006508
Lan2g0739 475 Gene3D Acid Proteases 296 475 IPR021109 -
Lan2g0739 475 Gene3D Acid Proteases 110 295 IPR021109 -
Lan2g0739 475 SUPERFAMILY Acid proteases 127 475 IPR021109 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan2g0739 Lan-Chr2 15704152 15705849 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan2g0739 132 475 Miscellaneous Gene Families AT1G77480 27.778 2.97e-27 111
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan2g0739 K22683 - gmx:100791511 711.835
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan16g1241 16 20442626 20445518 Lan2g0739 2 15704152 15705849 PCT
Lan2g0739 2 15704152 15705849 Lan16g1241 16 20442626 20445518 PCT