Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan2g0606 ATGCCGCTTTTACCTAAAAGCGATTTGATTCATATTCGTGAGGTTTGGAACGATAACCTGGAAGAGGAATTCGAGCTGATAAGGGAAATTGTTGATGATTACCCTTACATCGCGATGGACACGGAATTTCCGGGGATTGTTCTTCGACCAGTGGGGAATTTCAAGAATAGTTATGATTATCATTACCAAACCCTAAAGGACAATGTTGATATGCTCAAGTTGATTCAATTGGGCCTCACCTTCTCGGATGAGGAAGGGAATCTTCCCACGCGTGGGACCAATGGTCAGTGCATTTGGCAATTCAATTTCCGCGAATTCAATGTGAATGAGGATGTTTTCGCAAATGACTCGATCGAGCTTTTGAGACAGAGTGGCATTGATTTCAAGAAGAACAATGAGATGGGTATCGATGCGAAGCGGTTTGGTGAGCTTTTGATGTCATCTGGGATTGTGTTGAATGATAATGTTCATTGGGTTACTTTCCATAGTGGTTATGATTTTGGATACTTGTTAAAGCTTTTAACTTGTAAGAATTTGCCTGATACCAAAGTTGGGTTTTTTAACCTTATCAACATGTATTTCCCTACGGTTTATGACATCAAGCATCTCATGAAGTTTTGCAATAGCCTTCATGGAGGGCTGAACAAGCTTGCAGAGTTGTTGGAGGTGGAGAGGGTTGGGATTTGTCATCAGGCTGGTTCGGATAGTTTGCTCACATCTTGTACATTCAGGAAGTTGAAAGAGAATTTCTTTAGTGGATCCTTGGAGAAGTATGCCGGTGTCTTGTACGGGTTAGGTGTTGAGAATGGACAGAGTTCTTCTCATTGA 828 0.4167 MPLLPKSDLIHIREVWNDNLEEEFELIREIVDDYPYIAMDTEFPGIVLRPVGNFKNSYDYHYQTLKDNVDMLKLIQLGLTFSDEEGNLPTRGTNGQCIWQFNFREFNVNEDVFANDSIELLRQSGIDFKKNNEMGIDAKRFGELLMSSGIVLNDNVHWVTFHSGYDFGYLLKLLTCKNLPDTKVGFFNLINMYFPTVYDIKHLMKFCNSLHGGLNKLAELLEVERVGICHQAGSDSLLTSCTFRKLKENFFSGSLEKYAGVLYGLGVENGQSSSH* 276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan2g0606 275 Gene3D - 3 269 IPR036397 GO:0003676
Lan2g0606 275 Pfam CAF1 family ribonuclease 15 136 IPR006941 -
Lan2g0606 275 SUPERFAMILY Ribonuclease H-like 12 265 IPR012337 -
Lan2g0606 275 PANTHER CCR4-NOT TRANSCRIPTION COMPLEX SUBUNIT 1 273 IPR039637 GO:0004535|GO:0030014
Lan2g0606 275 PANTHER CCR4-ASSOCIATED FACTOR 1 HOMOLOG 6-RELATED 1 273 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan2g0606 Lan-Chr2 9938584 9940588 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan2g0606 K12581 - zju:107409059 529.25
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan5g0506 5 10500403 10501541 Lan2g0606 2 9938584 9940588 LSH
Lan9g0599 9 8702716 8704087 Lan2g0606 2 9938584 9940588 LSH