Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan2g0397 ATGATTTTATCTTCAATATGGGTGTTGACCTTTTTTTCTTTCATTTATGTTAATGGTGTTCTTCCTATTGAAGCTACCCACCATTCTTTTAGAGAACTTCAGAATCTATCATCTGATTATTACAAACAACCTTACAGAACTGCTTATCACTTTCAACCTCCAAAGAATTGGATAAATGATCCTAATGGACCATTGAGATACAAAGGATTGTATCACCTGTTCTACCAATACAACCCTAAAGGTGCAGTCTGGGGAAATATTGTGTGGGCCCACTCAGTATCAAAGGATCTTGTAAATTGGGCCCCACTTGATCCTGCCATCTTTCCATCTCAGCCGTCAGATATCAATGGCTGTTGGTCAGGATCAACTACATTAATTCATGGGGGCAAACCAGTAATTTTGTACACAGGAATCAACCCTTTGAATCAACAAGTTCAAAACTTAGCCTACCCTAAAAACTTGTCTGACCCATTTCTAAGGGAATGGGTTAAGTCACCCAAAAACCCACTAATGGCACCAACTAGTGCTAATAAGATAAATTCAAGTTCTTTTAGGGACCCTACCACTTCTTGGCTAGGGAAAGATGGGTATTGGAGGGTATTAATTGGGAGCAAAAGGAACACTTTAGGGTTAGCAATTTTGTATAAAAGCAAGGATTTTGTTAATTGGGCTAAAGCTAAATACCCATTACATTCAGTCCAAGGTACTGGAATGTGGGAGTGCCCTGATTTTTTCCCAATTCTAAATGATAGTCCAATTGGTATTGACACATCTTTTAATGGTGATAATATTAGGCATGTGCTTAAGGTTAGTTTGGATGATAAAAAACATGATTACTATATGATTGGGAGTTATGATATAGTTAAGGATAAATTTATACCTGATAAAGCATTCAAGGATAGTGAATCATTTTTAAGATATGATTATGGAAAATATTATGCATCAAAAACTTTCTTTGATGATGGAAAGAATAGAAGGATATTGCTTGGTTGGGTCAATGAGTCTTCAAGTGTTGCTCATGATATTAAGAAAGGATGGTCTGGAATCCATGCAATTCCAAGGGCTATATGGCTAGATAAGTCAGGTAAACAATTGGTGCAATGGCCAGTTGTGGAAATTGAAAAGCTACGTGCAAATCCAGTCAATTGGCCTACTAAACTGCTCAAGGGTGGTCACCTGCTTCAAATTAATGGTGTCACAGCAGCACAAGCTGATGTTGAAATTTCATTTGAGGTGAATAATTTAGGAGAGGCTGAAGTATTGGACAATTGGACAGACCCTCAAAGTCTCTGTAGCCAAAAGGGTCCAACCTATAAAAGTGGATTAGGACCTTTTGGTCTGTTAGTTTTTGCTTCAAAGGGATTGCAAGAGTATACATCAGTGTACTTCAAAATATTCAGATACCAACACAAAAATTTGGTGCTATTGTGTAGTGACCAAAGCAGGTCTTCATTGGACAACAATAATGATAAAACCAATTATGGGACTTTTGTGGATGTGGACCCTCTTCATGAGAAGCTGTCATTGAGAAGTTTGATTGATCACTCAGTCGTAGAGAGTTTTGGAGGAGAAGGAAAAGCTTGTATCACAGCTAGAGTTTATCCGACATTGGCGATCAATGATGAGGCACAACTATATGTTTTTAATAATGGAACTGCAGATGTTAAGTTAACAAGATTGAGCGCTTGGAGCTTGAAGAAAGCACAAATAAATGGAAAAATTAAGATAGATAAAACTGGACTTTGA 1746 0.374 MILSSIWVLTFFSFIYVNGVLPIEATHHSFRELQNLSSDYYKQPYRTAYHFQPPKNWINDPNGPLRYKGLYHLFYQYNPKGAVWGNIVWAHSVSKDLVNWAPLDPAIFPSQPSDINGCWSGSTTLIHGGKPVILYTGINPLNQQVQNLAYPKNLSDPFLREWVKSPKNPLMAPTSANKINSSSFRDPTTSWLGKDGYWRVLIGSKRNTLGLAILYKSKDFVNWAKAKYPLHSVQGTGMWECPDFFPILNDSPIGIDTSFNGDNIRHVLKVSLDDKKHDYYMIGSYDIVKDKFIPDKAFKDSESFLRYDYGKYYASKTFFDDGKNRRILLGWVNESSSVAHDIKKGWSGIHAIPRAIWLDKSGKQLVQWPVVEIEKLRANPVNWPTKLLKGGHLLQINGVTAAQADVEISFEVNNLGEAEVLDNWTDPQSLCSQKGPTYKSGLGPFGLLVFASKGLQEYTSVYFKIFRYQHKNLVLLCSDQSRSSLDNNNDKTNYGTFVDVDPLHEKLSLRSLIDHSVVESFGGEGKACITARVYPTLAINDEAQLYVFNNGTADVKLTRLSAWSLKKAQINGKIKIDKTGL* 582
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan2g0397 581 SUPERFAMILY Arabinanase/levansucrase/invertase 40 370 IPR023296 -
Lan2g0397 581 Pfam Glycosyl hydrolases family 32 N-terminal domain 50 369 IPR013148 -
Lan2g0397 581 CDD GH32_Fruct1-like 56 358 - -
Lan2g0397 581 Pfam Glycosyl hydrolases family 32 C terminal 372 564 IPR013189 -
Lan2g0397 581 Gene3D - 380 565 - -
Lan2g0397 581 PANTHER CELL-WALL INVERTASE 3 571 - -
Lan2g0397 581 PANTHER BETA-FRUCTOFURANOSIDASE, INSOLUBLE ISOENZYME CWINV1-RELATED 3 571 - -
Lan2g0397 581 SUPERFAMILY Concanavalin A-like lectins/glucanases 369 567 IPR013320 -
Lan2g0397 581 SMART glyco_32 50 525 IPR001362 GO:0004553|GO:0005975
Lan2g0397 581 ProSitePatterns Glycosyl hydrolases family 32 active site. 50 63 IPR018053 GO:0004553|GO:0005975
Lan2g0397 581 Gene3D Glycosyl hydrolase domain; family 43 54 379 IPR023296 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan2g0397 Lan-Chr2 4021975 4027330 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan2g0397 67 571 Glycoside Hydrolase AT3G13790 64.912 0.0 682
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan2g0397 K01193 - gmx:547681 974.541
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan10g0288 10 1888022 1892095 Lan2g0397 2 4021975 4027330 PCT
Lan2g0397 2 4021975 4027330 Lan10g0288 10 1888022 1892095 PCT