Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan10g0288 ATGGCAATCTCTTCATTTTTCTTGTTAGCTACATTTTCTTTCATATATGGCAATGCTGTTCTTCACATTGAAGCTAGCCACCATGTTCATAGAAATCTTCAGAGTTTAACTTCTGATTCTTCCAATCAACCTTATAGAACTGCTTATCATTTTCAACCTCCCAAGAATTGGATAAATGACCCTAATGGACCAATGAGATATAAAGGACTCTACCACCTTTTCTATCAATACAATCCAAAAGGTGCAGTTTGGGGCAATATTGTATGGGCCCACTCAATATCAAAGGATCTCATAAATTGGACCCCACTTGATCATGCCATCTTTCCTTCTCAGCCCTCTGATATCAATGGTTGTTGGTCTGGCTCAGCCACTATACTCCCTGGGGGCAAACCTGTCATTTTATACACAGGAATTGACCCAATGAAAAACCAAGTACAAAACTTAGCATACCCCAAAAATATGTCTGATCCATTACTTAGGGAATGGGTTAAGTCACCAAAAAATCCACTAATGGCACCAACTATTGCTAACAAAATTAATTCAAGCTCATTTAGAGACCCTACCACTGCATGGCTAGGGAAAGATGGGTATTGGAGGGTAATAATTGGAAGCAAAAGAAACACTAGGGGCATGGCAATTTTGTATAAAAGCAAAGATTTTGTTAATTGGGTTCAAGCCAAATATCCATTACTTGCAGCCCAAGGCACTGGAATGTGGGAGTGTCCTGATTTTTATCCAGTACTTAATAAGACACCATTTGCTATTGGTGTTGATACATCAATAAATGGTGATGATGTTATGCATGTGCTTAAGGTAAGCTTGGATGATACAAAACATGATCATTATTTGATTGGAAGATACAACATTGACAAGGATATATTTGTTCCTTATAATGGATTTGAGGATAACCAATTTGTGTTGAGATATGATTATGGGAAATATTATGCCTCAAAAACCACTTTTGATGATGGAAAGAACAGAAGAATCTTGTTTGGTTGGGTTAATGAATCCTCAAGTGTTGCAGATGATATCAAAAAAGGATGGTCTGGAATCCATGCTATTCCAAGGGCTATCTGGCTTCATAAATCTGGGAAACAATTGGTACAATGGCCCATCAATGAAATTGAAAGGCTACGTGTGAACCCTGTAAATTATCCCACCAAAGTGCTCAAGGGAGGTGAACTACTTCAAGTTCCTGGTGTCACTGCAGCACAGGCTGATGTTGAAATATCATTTGAAGTGAATGAGTTTGAAAAGGCAGAGATATTGAAATCTTGGACAAACCCCGAGATTCTGTGTGACAAAAAGGGTGCAGCTGTTAAAGGTGGACTAGGACCTTTTGGTCTATTAGTTTTTGCTTCTAAAGGGTTGGAAGAGTACACAGCAGTGTTCTTCAGAATATTTAGATACCAGCACAAAAATTTGGTGCTCATGTGCAGTGACCAAAGCAGGTCATCATTGTATAAAGATAATGATATGACCACTTATGGTACTTTTGTGGATGTGGACCCTCTTCATGAGAAGCTGTCTCTAAGAAGTTTGATTGATCACTCTGTAGTGGAGAGTTTTGGGGCAGAAGGAAGGGCTTGTATCACATCTAGAGTTTATCCTACATTGGCAATCAATGACAAGGCACAACTATACGCTTTTAACAATGGAACTTCCAATGTCAAGATCACAAGATTGACTGCATGGAGCATGAAGAAAGCAAAAATCAATTGA 1722 0.3862 MAISSFFLLATFSFIYGNAVLHIEASHHVHRNLQSLTSDSSNQPYRTAYHFQPPKNWINDPNGPMRYKGLYHLFYQYNPKGAVWGNIVWAHSISKDLINWTPLDHAIFPSQPSDINGCWSGSATILPGGKPVILYTGIDPMKNQVQNLAYPKNMSDPLLREWVKSPKNPLMAPTIANKINSSSFRDPTTAWLGKDGYWRVIIGSKRNTRGMAILYKSKDFVNWVQAKYPLLAAQGTGMWECPDFYPVLNKTPFAIGVDTSINGDDVMHVLKVSLDDTKHDHYLIGRYNIDKDIFVPYNGFEDNQFVLRYDYGKYYASKTTFDDGKNRRILFGWVNESSSVADDIKKGWSGIHAIPRAIWLHKSGKQLVQWPINEIERLRVNPVNYPTKVLKGGELLQVPGVTAAQADVEISFEVNEFEKAEILKSWTNPEILCDKKGAAVKGGLGPFGLLVFASKGLEEYTAVFFRIFRYQHKNLVLMCSDQSRSSLYKDNDMTTYGTFVDVDPLHEKLSLRSLIDHSVVESFGAEGRACITSRVYPTLAINDKAQLYAFNNGTSNVKITRLTAWSMKKAKIN* 574
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan10g0288 573 PANTHER CELL-WALL INVERTASE 2 573 - -
Lan10g0288 573 SUPERFAMILY Concanavalin A-like lectins/glucanases 371 569 IPR013320 -
Lan10g0288 573 SUPERFAMILY Arabinanase/levansucrase/invertase 41 372 IPR023296 -
Lan10g0288 573 SMART glyco_32 50 527 IPR001362 GO:0004553|GO:0005975
Lan10g0288 573 CDD GH32_Fruct1-like 56 360 - -
Lan10g0288 573 Gene3D Glycosyl hydrolase domain; family 43 54 381 IPR023296 -
Lan10g0288 573 ProSitePatterns Glycosyl hydrolases family 32 active site. 50 63 IPR018053 GO:0004553|GO:0005975
Lan10g0288 573 Pfam Glycosyl hydrolases family 32 N-terminal domain 50 371 IPR013148 -
Lan10g0288 573 Gene3D - 382 567 - -
Lan10g0288 573 Pfam Glycosyl hydrolases family 32 C terminal 374 566 IPR013189 -
Lan10g0288 573 PANTHER BETA-FRUCTOFURANOSIDASE, INSOLUBLE ISOENZYME CWINV1-RELATED 2 573 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan10g0288 Lan-Chr10 1888022 1892095 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan10g0288 65 573 Glycoside Hydrolase AT3G13790 65.830 0.0 681
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan10g0288 K01193 - gmx:100776791 1021.54
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan10g0288 10 1888022 1892095 Lan2g0397 2 4021975 4027330 PCT
Lan2g0397 2 4021975 4027330 Lan10g0288 10 1888022 1892095 PCT