Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan2g0212 ATGGACATGGATGTTGAGGAACAACCTTCACCCAACAACCTTAAACGCTTTGGTCTTAAAAACTCTATTCAAACCAACTTCGGCGACGACTATGTTTTCCAAATCATCTCAAAGGATGATTGGAGTTCAATGGCAGTGTCACTTTCAACGAATACAGTTAAACTGTATTCACCAGAGAGGGGTCAATATTATGGAGAATGCAAGGGTCATCATGCAACTATTAACCAGATTCTGTTTTCAGATGCTTCCAATGCTCATGTTTTAAGCTCTTGTTCTTCAGATGGAACTATTAGAGCTTGGGACACAAGAACATTTCAGCAGGTTTCTTCCATTATTGCCGGTCCTTCTCAAGAGGTTTTCAGCTTCTCTTTCGGAGGGCCTGGTGGAAATTTAGTTGCTGCCGGGTGTAAATCACAGATACTCTTTTGGGATTGGAGAAATAGGAAGCAAATTGCATGCCTTGAAGAATCTCATGTGGATGATGTTACTCAGGTTCATTTTGTCCATGAAGAACAAGGCAAGCTTATTTCTGCTTCAGTAGATGGGTTGATATGCACATTTGATACCACCGGAGATATCAATGATGAAGATCATCTGGAATCAGTGATTAATGTGGGGACTTCAATTGCAAAAGTGGGGATTTTTGGAGATAACTATCAAAGGCTCTGGTGTCTAACACATATTGAAACCTTAGGTATCTGGGACTGGAAAAATGGTAGAAATGAAGTAAACTTCTCGGATGCTCGTGGTTTAGCTTCTGAAAGTTGGAATTTGGATCAAGTTGACTATTTTGTTGATTGCCACTATTCTAAAGAAGCTGAAAAACTATGGCTGATTGGTGGCACTAATGCCGGTGCATTGGGCTACTTTCCTGTAAATCACAAGGGAGTGGCAACAATTGGAGGTGCAGAGGCAATTCTCGAGGGCGGCCATACAGGCGTTGTTAGGAGTGTTTTACCCATGTCAAGATTTCATGGTGCACCTGCTCCTATTAGTGGTAGCTCTGGCATTTTTGGATGGACAGGTGGGGAAGATGGCCGTCTATGTTGTTGGTTGTCCGATGATTCTCCTCAAATAAATCGATCGTGGATTTCGAGCACACTGGTTATGAAGCCAGAAAAGACCGGCAAGAAAAATCGTCACCACCCCTATTAG 1155 0.4234 MDMDVEEQPSPNNLKRFGLKNSIQTNFGDDYVFQIISKDDWSSMAVSLSTNTVKLYSPERGQYYGECKGHHATINQILFSDASNAHVLSSCSSDGTIRAWDTRTFQQVSSIIAGPSQEVFSFSFGGPGGNLVAAGCKSQILFWDWRNRKQIACLEESHVDDVTQVHFVHEEQGKLISASVDGLICTFDTTGDINDEDHLESVINVGTSIAKVGIFGDNYQRLWCLTHIETLGIWDWKNGRNEVNFSDARGLASESWNLDQVDYFVDCHYSKEAEKLWLIGGTNAGALGYFPVNHKGVATIGGAEAILEGGHTGVVRSVLPMSRFHGAPAPISGSSGIFGWTGGEDGRLCCWLSDDSPQINRSWISSTLVMKPEKTGKKNRHHPY* 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan2g0212 384 ProSiteProfiles Trp-Asp (WD) repeats profile. 67 110 IPR001680 GO:0005515
Lan2g0212 384 PANTHER UNCHARACTERIZED 14 384 IPR039328 -
Lan2g0212 384 ProSitePatterns Trp-Asp (WD) repeats signature. 88 102 IPR019775 -
Lan2g0212 384 Gene3D - 30 154 IPR015943 GO:0005515
Lan2g0212 384 SUPERFAMILY WD40 repeat-like 32 238 IPR036322 GO:0005515
Lan2g0212 384 Gene3D - 155 368 IPR015943 GO:0005515
Lan2g0212 384 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 67 104 - -
Lan2g0212 384 SMART WD40_4 60 101 IPR001680 GO:0005515
Lan2g0212 384 SMART WD40_4 104 144 IPR001680 GO:0005515
Lan2g0212 384 SMART WD40_4 147 188 IPR001680 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan2g0212 Lan-Chr2 1774360 1778298 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan2g0212 K24758 - gmx:100794786 658.677
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan16g0914 16 16118471 16123898 Lan2g0212 2 1774360 1778298 LSH