Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan16g0914 ATGGAAACAAGTGCAGCCATGGATATTGAGGAACAACCTTCACCCAACAACAACAACAACAACCTTAAACGCTTTGGTCTGAAAAACTCTATTCAAACCAACTTTGGTGATGACTATGTTTTCCAAATCATCCCAAAGGATGATTGGAGTTCAATGGCGGTGTCACTTTCAACGAACACAGTGAAACTGTATTCACCAGAGAAGGGTCAATATTATGGAGAGTGCAAGGGTCACTATGCAACTATCAATCAGATTATGTTTTCTGATGCTTCCAATTCTCATGTTTTAAGCTCTTGTTCTTCAGATGGAACTATTAGAGCTTGGGACACAAGAACGTTTCAGCAGATTTCTTCCATCAATGCCGGTCCTTCTCAAGAGGTCTTCAGCTTCTCTTTTGGAGGGCCTGGTGGGAATTTAATTGCTGCCGGGTGTAAATCACAGATACTCTTTTGGGATTGGAGAAATAAGAAGCAAATTGCATGCCTTGAAGAATCTCACGTGGATGATGTTACTCAGGTTCATTTTGTCCATGAAGAACAAAGCAAGCTTATTTCTACTTCAGTAGATGGGTTGATATGCGCGTTTGATACCACCGGAGATATCAATGATGATGATCATCTAGAATCAGTGATTAATGTGGGGACTTCAATTGCGAAAGTGGGGATTTTTGGAGATAACTGTCAGAAGCTTTGGTGTTTAACACATATCGAAACCTTGGGTATCTGGGACTGGAAAAACGGTACAAATGAAGTAAACTTCTCGGATGCTCGTGGTTTAGCTTCTGAAAGCTGGAATTTGGATCAGGTCGATTATTTTGTTGATTGTCACTACTCGAAAGAAGCTGAAAAACTATGGGTGATTGGTGGAACTAATGCCGGTGCATTGGGCTACTTTCCTGTAAATGACAAGGGACAGGCAACAATCGGAGGCGCAGAAGCAATCCTCGAGGGCGGCCATACAGACGTCGTTAGGAGTGTTTTACCCATGTCGAGATTTCACGGTGGATCTGCTCCTAGTAGTGTTAGCTCTGGCATTTTTGGATGGACAGGTGGGGAAGATGGTCGTTTATGTTGTTGGTTATCTGATGATTCCACTCAAATAAATCAATCATGGATTGCGAGCTCGATGATTATGAAGCCAGAAAAAACTCGCAAGAAAAAACGACATCACCCGTATTAG 1179 0.4215 METSAAMDIEEQPSPNNNNNNLKRFGLKNSIQTNFGDDYVFQIIPKDDWSSMAVSLSTNTVKLYSPEKGQYYGECKGHYATINQIMFSDASNSHVLSSCSSDGTIRAWDTRTFQQISSINAGPSQEVFSFSFGGPGGNLIAAGCKSQILFWDWRNKKQIACLEESHVDDVTQVHFVHEEQSKLISTSVDGLICAFDTTGDINDDDHLESVINVGTSIAKVGIFGDNCQKLWCLTHIETLGIWDWKNGTNEVNFSDARGLASESWNLDQVDYFVDCHYSKEAEKLWVIGGTNAGALGYFPVNDKGQATIGGAEAILEGGHTDVVRSVLPMSRFHGGSAPSSVSSGIFGWTGGEDGRLCCWLSDDSTQINQSWIASSMIMKPEKTRKKKRHHPY* 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan16g0914 392 Gene3D - 126 387 IPR015943 GO:0005515
Lan16g0914 392 SMART WD40_4 155 196 IPR001680 GO:0005515
Lan16g0914 392 SMART WD40_4 112 152 IPR001680 GO:0005515
Lan16g0914 392 SMART WD40_4 68 109 IPR001680 GO:0005515
Lan16g0914 392 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 75 112 - -
Lan16g0914 392 ProSiteProfiles Trp-Asp (WD) repeats profile. 75 118 IPR001680 GO:0005515
Lan16g0914 392 SUPERFAMILY WD40 repeat-like 48 366 IPR036322 GO:0005515
Lan16g0914 392 MobiDBLite consensus disorder prediction 1 21 - -
Lan16g0914 392 ProSitePatterns Trp-Asp (WD) repeats signature. 96 110 IPR019775 -
Lan16g0914 392 PANTHER UNCHARACTERIZED 22 392 IPR039328 -
Lan16g0914 392 Gene3D - 45 125 IPR015943 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan16g0914 Lan-Chr16 16118471 16123898 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan16g0914 K24758 - gmx:100794786 657.136
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan16g0914 16 16118471 16123898 Lan2g0212 2 1774360 1778298 LSH