Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan20g1422 ATGGCTTCTTCATCAACCTTCTCCAACCTTCTCTCTCTCATCATACCCACAAAACAACCCTCTATTCCACCACCACCCAACAATCTCAATTTCCCTTTTTCATCAACCCCATTTCAAAAAATCTCTTCTTTATCTCATCACTCATCCTCTGTGATGAATCCCTCACTTGCGTATTCGAACATGATGTTGTTTAAATCAGCGTATAATGTTCAGGTTGTGGTGGGAGATGATGAAACTGAAGAGAGGTTGTTGAATAGGTTCAGGAGAGAAGTTATGAAAGCTGGTGTTATACAAGAGTGTAAGAGGAGAAGGTACTATGAGAATAAGCATGATAAGAAGAAGCGTAAGGCTCGTGAAGCTTCTAGACGTAATCGCAAATGGCGCCCTTTTCAAAGAACTGCGGTGCCAAACAAGGATGGTTTCCCAACTAAGAAGGGAGATGATGACGACGACGATAACTGGGATCTACCTGAAGGAGACACTGCGATTTAA 492 0.4228 MASSSTFSNLLSLIIPTKQPSIPPPPNNLNFPFSSTPFQKISSLSHHSSSVMNPSLAYSNMMLFKSAYNVQVVVGDDETEERLLNRFRREVMKAGVIQECKRRRYYENKHDKKKRKAREASRRNRKWRPFQRTAVPNKDGFPTKKGDDDDDDNWDLPEGDTAI* 164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan20g1422 163 TIGRFAM S21p: ribosomal protein bS21 70 126 IPR001911 GO:0003735|GO:0005840|GO:0006412
Lan20g1422 163 Pfam Ribosomal protein S21 71 125 IPR001911 GO:0003735|GO:0005840|GO:0006412
Lan20g1422 163 MobiDBLite consensus disorder prediction 108 129 - -
Lan20g1422 163 PANTHER PROTEIN S21 FAMILY PROTEIN, PUTATIVE-RELATED 36 160 - -
Lan20g1422 163 MobiDBLite consensus disorder prediction 108 163 - -
Lan20g1422 163 Hamap 30S ribosomal protein S21 [rpsU]. 69 125 IPR001911 GO:0003735|GO:0005840|GO:0006412
Lan20g1422 163 Gene3D Ribosomal protein S8 84 121 IPR038380 -
Lan20g1422 163 PRINTS Ribosomal protein S21 family signature 81 90 IPR001911 GO:0003735|GO:0005840|GO:0006412
Lan20g1422 163 PRINTS Ribosomal protein S21 family signature 93 103 IPR001911 GO:0003735|GO:0005840|GO:0006412
Lan20g1422 163 PRINTS Ribosomal protein S21 family signature 105 115 IPR001911 GO:0003735|GO:0005840|GO:0006412
Lan20g1422 163 PANTHER MITOCHONDRIAL 28S RIBOSOMAL PROTEIN S21 36 160 IPR001911 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan20g1422 Lan-Chr20 20885773 20887819 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan20g1422 - - lang:109335213 256.914
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan6g1710 6 28240197 28242104 Lan20g1422 20 20885773 20887819 PCT
Lan20g1422 20 20885773 20887819 Lan6g1710 6 28240197 28242104 PCT