Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan20g0607 ATGGCTCCTACTCAAATAGCCACCGTTGATGCTCTCTCTATGAAGGTAGCTCAAGGTTCTCTTGGCCGTGCTTTTGTGACGTTCCTGGCTGGGAATGGTGACTATTGGAAAGGTGTTGTTGGGTTGGCCAAAGGTCTTAGAAAGGTTAACTCAGCATACCCTCTTGTTGTTGCTATGTTACCTGATGTTCCTGAAGAACACCGTGAGATTTTGATCAATCAAGGTTGTGTTCTAAGAGAAATTATGCCTGTGTATCCACCAGAGAACCAAACCCAGTTTGCTATGGCTTACTATGTTATCAACTACTCCAAGCTCCGTATTTGGGAGTTTGTGGAGTACACCAAGATGATTTACCTAGACGGTGATATTCAAGTTTTTGAGAACATTGACCACCTGTTTGACATGCCCGACAATTACTTCTATGCTGTGAAGGATTGTTTCTGTGAACCCTCTTGGAAACACACCAAACAGTACCAGATTGGTTACTGTCAACAGTGCCCGGATAAGGTTCACTGGCCTTCTGATTTTGGTCCCAAACCTCCTCTCTATTTCAATGCTGGCTTCTTTGTTTATGAGCCTAATTTGGATACTTACCATGACCTCCTTCAAACACTTATAACAACCACCCCTACTTCATTTGCTGAGCAGGACTATTTGAACATGTATTTCAAGGACAAATACAAGCCAATACCCAATATTTACAATCTTGTGCTAGCCATGTTGTGGCGTCACCCTGAGAATGTTGAGCTTGACAAAGTCAAAGTGGTTCACTACTGTGCTTTTGGATCTAAGCCATGGAGGTACACAGGGAAAGAAGAGAACATGCAGAGGGAAGATATCAAGATGCTGGTGAAGAAGTGGTGGGATATATATGATGATGAAACTTTGGACTATAACAATGCCTCTAACGTGGATAACTTGAAGGTGGCAATTAATGAAGCTGGTGCTGTTGAGTTTATCGCTGCTTCACATGCTGCTTAG 981 0.4281 MAPTQIATVDALSMKVAQGSLGRAFVTFLAGNGDYWKGVVGLAKGLRKVNSAYPLVVAMLPDVPEEHREILINQGCVLREIMPVYPPENQTQFAMAYYVINYSKLRIWEFVEYTKMIYLDGDIQVFENIDHLFDMPDNYFYAVKDCFCEPSWKHTKQYQIGYCQQCPDKVHWPSDFGPKPPLYFNAGFFVYEPNLDTYHDLLQTLITTTPTSFAEQDYLNMYFKDKYKPIPNIYNLVLAMLWRHPENVELDKVKVVHYCAFGSKPWRYTGKEENMQREDIKMLVKKWWDIYDDETLDYNNASNVDNLKVAINEAGAVEFIAASHAA* 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan20g0607 326 PANTHER GLYCOGENIN SUBFAMILY MEMBER 11 326 - -
Lan20g0607 326 SUPERFAMILY Nucleotide-diphospho-sugar transferases 26 295 IPR029044 -
Lan20g0607 326 PANTHER GALACTINOL SYNTHASE 2 11 326 - -
Lan20g0607 326 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 22 300 IPR029044 -
Lan20g0607 326 Pfam Glycosyl transferase family 8 27 269 IPR002495 GO:0016757
Lan20g0607 326 CDD GT8_Glycogenin 23 293 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan20g0607 Lan-Chr20 4795636 4797927 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan20g0607 1 326 Glycosyltransferase AT1G56600 70.833 3.23e-179 497
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan20g0607 K18819 - gmx:100804007 557.755
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan16g0975 16 16820562 16822906 Lan20g0607 20 4795636 4797927 PCT
Lan20g0607 20 4795636 4797927 Lan16g0975 16 16820562 16822906 PCT