Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan16g0975 ATGGCACCTAATATCACCACCACTGCAGTGAATGCCACGGCTGAGCAACCGAAGAACGGCGGCGGAAGTGGCCATGCTTTTGTGACATTCTTAGCTGGAAATGGTGACTATGTGAAAGGTGTTGTAGGGTTAGCAAAAGGGCTTAGGAAAGTGAAAAGTGACTACCCTCTTGTTGTTGCTGTGTTACATGATGTACCTGAAGAACATCGAAAGATTCTTAAATCACAAGGTTGCATTGTGAGAGAGATTGAACCAGTGTATCCTCCTAAGAATCAAACTCAGTTTGCTATGGCTTATTATGTTATTAATTACTCAAAACTCAGAATTTGGGAGTTTGTGGAATACAGGAAGATGATTTACCTAGATGGTGATATCCAAGTATTTGAAAACATTGATCATCTTTTTGATTTGCCTGATAATTACTTTTATGCTGTTATGGACTGTTTTTGTGAGAAAAGTTGGACCCATACCCCTCAATATCAAATTGGATATTGTCAACAATGCCCTCATAAGGTTCAATGGCCTTCAAATTTGGGTCCAAAACCTCCTCTCTATTTCAATGCTGGGATGTTTGTTTATGAGCCCAATCTTATCACTTACCATGAACTACTTCAAAAACTTCAAGTTACTAAACCCACTTCCTTTGCTGAACAGGACTTTCTAAACATGTTCTTCAAGGAAAAATACAAGCCTATACCAAATGTGTATAACCTAGTATTAGCCATGTTATGGCGTCACCCTGAAAATGTTGAGCTTGAAAAAGTGAAAGTTGTTCACTATTGTGCTGCTGGTTCTAAACCTTGGAGGTACACGGGGAAAGAAGAGAATATGGAGAGAGAAGATATAAAGATGGTAGTGAAGAAATGGTGGGACATATATGAAGAAGAAACATTGGACTATGAAGATCCTCTTAGTTTGGAATGTTTTAAAGTGGCACTTAAGGATAATGCTAGTACCATTAAGTTTGTCCCTGCCCCTTCTGCTGCATAA 990 0.3889 MAPNITTTAVNATAEQPKNGGGSGHAFVTFLAGNGDYVKGVVGLAKGLRKVKSDYPLVVAVLHDVPEEHRKILKSQGCIVREIEPVYPPKNQTQFAMAYYVINYSKLRIWEFVEYRKMIYLDGDIQVFENIDHLFDLPDNYFYAVMDCFCEKSWTHTPQYQIGYCQQCPHKVQWPSNLGPKPPLYFNAGMFVYEPNLITYHELLQKLQVTKPTSFAEQDFLNMFFKEKYKPIPNVYNLVLAMLWRHPENVELEKVKVVHYCAAGSKPWRYTGKEENMEREDIKMVVKKWWDIYEEETLDYEDPLSLECFKVALKDNASTIKFVPAPSAA* 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan16g0975 329 SUPERFAMILY Nucleotide-diphospho-sugar transferases 28 299 IPR029044 -
Lan16g0975 329 PANTHER GLYCOGENIN SUBFAMILY MEMBER 1 307 - -
Lan16g0975 329 MobiDBLite consensus disorder prediction 1 20 - -
Lan16g0975 329 CDD GT8_Glycogenin 25 295 - -
Lan16g0975 329 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 23 301 IPR029044 -
Lan16g0975 329 Pfam Glycosyl transferase family 8 29 271 IPR002495 GO:0016757
Lan16g0975 329 MobiDBLite consensus disorder prediction 1 18 - -
Lan16g0975 329 PANTHER GALACTINOL SYNTHASE 1 1 307 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan16g0975 Lan-Chr16 16820562 16822906 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan16g0975 1 329 Glycosyltransferase AT1G56600 71.681 0.0 502
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan16g0975 K18819 - gmx:100800249 575.089
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan16g0975 16 16820562 16822906 Lan20g0607 20 4795636 4797927 PCT
Lan20g0607 20 4795636 4797927 Lan16g0975 16 16820562 16822906 PCT