Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan20g0596 ATGGCCTCTCATCAAAACGGCGACGTTTCTTCCCACCTTCCCAAAAAACCAAAACTCTCTTCTACCATCACCGACTCAGAAATTCATTCCGAATTCTCTCACCACGACCCCGCCGTCGCCAGAATCAACAACGGCAGCTTCGGCTGCTGCCCCGCCTCCGTCATCTCCGCCCAGCACCACTGGCAGCTCAAAAATCTCCGTCAACCGGATCACTTCTACGTTAACCACCTCAAGCAAGGTATTCTTAATTCCAGAACTATAATCAAGAACCTCGTCAACGCTGAACACCTTGATGAGATCGCTATCGTTGATAACGCCTCCACCGCCACCACCATCGTCCTTCAACAAACCGCGTGGTCCTTCCACGAAGGAAGGTTCCAGAAAGGTGACGTTGTCGTCGTTCTTCACTACGCGTACGGTGCGGTTAAGAAATCCATTGAGGCCTACGTGGCACGTGCTGGAGGTAAAGTCATCGAGGTGCAGCTTCCTTTTCCGGTAAAATCGAACGAGGAAATTATAACGGAATTTAGAACTGCTTTGGAGAGAGGGAAGAGTAATGGTAATAGGGTTAGGTTAGCGGTTATTGATCATGTGACTTCGATGCCTAGTGTTGTGATTCCTGTGAAGGAGTTGGTTAAGATTTGTAGAGAGGAAGGGGTGGATCAGGTTTTTATTGATGCAGCTCATGCTATTGGGTGTATTGATGTTGATATGCAAGAAATTGGGGCTGATTTCTATACTAGCAATTTGCATAAGTGGTTGTTTTGTCCACCTTCGATTGCGTTTCTATACACTCGCAGGTCGTTGAAGTGTAAAGATTTGCATCATCCTGTTGTATCTCATGAGTATGGGAAGGGTTTGGCTTCGGAGAGTGCTTGGATTGGGAATAGGGATTATAGCTCGCAATTGGTGGTTCCTACGGTTTTGGAATTTGTTAATAGGTTTGAAGGTGGGATTGAAGGGATTAAGAAGAGGAACCACAATGCTGCCTTTGAGATGGGTGAAATGTTGGCTGCAGCGTGGGGGACTCATCTTGGGAGTCCGAAGGAGATGTGTGCAAGCATGGTGATGGTGGGTTTGCCTGCTTGTTTGGGGATTAGTAGTGATTCTGATGCTATGAAGTTGAGAACTCATTTGAGGGATGATTTTGGAATTGAAGTTCCGATATATTTTCGACCACCGAGAGATGGGGAAGTTGGACTGCTAACTGGGTATGCTAGAATTTCTCATCAAGTTTACAACAAAATTGATGACTATTCCAAGTTCAGGGATGCAGTTAATCAACTCGTGACCAATGGGTTTACTTGTGCCCTTCTTTCTGCTTAA 1326 0.4608 MASHQNGDVSSHLPKKPKLSSTITDSEIHSEFSHHDPAVARINNGSFGCCPASVISAQHHWQLKNLRQPDHFYVNHLKQGILNSRTIIKNLVNAEHLDEIAIVDNASTATTIVLQQTAWSFHEGRFQKGDVVVVLHYAYGAVKKSIEAYVARAGGKVIEVQLPFPVKSNEEIITEFRTALERGKSNGNRVRLAVIDHVTSMPSVVIPVKELVKICREEGVDQVFIDAAHAIGCIDVDMQEIGADFYTSNLHKWLFCPPSIAFLYTRRSLKCKDLHHPVVSHEYGKGLASESAWIGNRDYSSQLVVPTVLEFVNRFEGGIEGIKKRNHNAAFEMGEMLAAAWGTHLGSPKEMCASMVMVGLPACLGISSDSDAMKLRTHLRDDFGIEVPIYFRPPRDGEVGLLTGYARISHQVYNKIDDYSKFRDAVNQLVTNGFTCALLSA* 442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan20g0596 441 MobiDBLite consensus disorder prediction 1 27 - -
Lan20g0596 441 SUPERFAMILY PLP-dependent transferases 33 430 IPR015424 -
Lan20g0596 441 Pfam Aminotransferase class-V 70 271 IPR000192 -
Lan20g0596 441 Gene3D - 52 331 IPR015421 GO:0003824
Lan20g0596 441 PANTHER L-CYSTEINE DESULFHYDRASE 3 441 - -
Lan20g0596 441 PANTHER ISOPENICILLIN N EPIMERASE-LIKE PROTEIN 3 441 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan20g0596 Lan-Chr20 4664866 4668971 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan20g0596 K22207 - gmx:100786129 724.931
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan16g0968 16 16753819 16757112 Lan20g0596 20 4664866 4668971 PCT
Lan20g0596 20 4664866 4668971 Lan16g0968 16 16753819 16757112 PCT