Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan16g0968 ATGGCTTCCATCAATGGAGACTCAATTTCTCACACTCCCAAAAAACCAAAGCTCTCATTTTCATCATCATCTTCTTCTTCTTCTTCCATCATTGCTCAAACCGAATTCTCTCACCACGACCCTTCCATTGCTCGCATCAACAACGGCAGCTTCGGTTGCTGCCCAGCCTCCGTCATCGCCGCCCAACAACAGTGGCAGCTCAACTATCTCCGGCAACCCGATCACTTCTACTTCAACGTCCTCAAAAAAGGTATCCTTCAATCAAGAACAATTATCAAACACCTCGTGAACGCGGAACACGTCGACGAGATTTCCATTGTCGACAACGCCACCACCGCCGCCGCCATCGTCCTCCAGAACGCCGCGTGGTCGTTCCACGAAGGACGGTTCAGCAAAGGCGATGTTGTTGTCATGCTTCATTACGCGTATGGCGCGGTTAAGAAATCGATTGAAGCGTATGTTACACGCGCTGGAGGTAAGGTTATTGAAGTGAATCTTCCTTTTCCTGTTACTTCGGATGATGAAATTGTTTCTGAATTTAAGAATGCGTTAGAGAGAGGGAAGAGTGATGGGAATAGGGTTAGGTTAGCTGTTATTGATCATGTTACTTCGATGCCAAGTGTCGTGATTCCGGTTAAGGATTTGGTTAGGATTTGTAGGGAGGAAGGTGTTGATCAGGTTTTTGTTGATGCTGCTCATTCAATTGGGTGTATTGATGTTGATGTGAAGGAGATCGGCGCGGATTTTTACACTAGCAATTTGCATAAGTGGTTCTTTTGCCCTCCTTCGGTTGCGTTCCTGTATTGCAGGAAGATGCCTAAGGGTTCCAATTTGCATCATCCGGTTGTGTCGCATGAGTATGGCAATGGGTTGGCTGTGGAGAGTGCTTGGATTGGGACTAGGGATTATAGTGCTCAGTTGGTGGTTCCGGCGGCTTTGGAATTCGTTAATAGGTTTGAAGGAGGTATTGAAGGGATCAAGAAGAGGAATCATGATGCTGTTGTGGAGATGGGAGAGATGCTGGTGAAAGCGTGGGGAACTCATCTAGGGAGTCCTCCGGATATGTGTGGTAGCATGATCATGGTAGGTTTGCCTGCTTGTTTGGGGATTAGTAGTGATGTGGATGCTCTCAAGTTAAGGACACATTTGAGGGATCATTTTGGTGTCGAAGTGCCAATCTATTATCGACCACCAAGAGATGGAGAAGTTGGGCCGATAACCGGATATGCCCGAATTTCCCATCAAGTATATAACACAGTTTCTGACTACTACAAGTTCAGGGATGCAGTTAACCAACTTGTGGACAATGGATTTACTTGTACTCTTCTTTCCGAGTGA 1338 0.4649 MASINGDSISHTPKKPKLSFSSSSSSSSSIIAQTEFSHHDPSIARINNGSFGCCPASVIAAQQQWQLNYLRQPDHFYFNVLKKGILQSRTIIKHLVNAEHVDEISIVDNATTAAAIVLQNAAWSFHEGRFSKGDVVVMLHYAYGAVKKSIEAYVTRAGGKVIEVNLPFPVTSDDEIVSEFKNALERGKSDGNRVRLAVIDHVTSMPSVVIPVKDLVRICREEGVDQVFVDAAHSIGCIDVDVKEIGADFYTSNLHKWFFCPPSVAFLYCRKMPKGSNLHHPVVSHEYGNGLAVESAWIGTRDYSAQLVVPAALEFVNRFEGGIEGIKKRNHDAVVEMGEMLVKAWGTHLGSPPDMCGSMIMVGLPACLGISSDVDALKLRTHLRDHFGVEVPIYYRPPRDGEVGPITGYARISHQVYNTVSDYYKFRDAVNQLVDNGFTCTLLSE* 446
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan16g0968 445 Pfam Aminotransferase class-V 57 337 IPR000192 -
Lan16g0968 445 Gene3D - 56 318 IPR015421 GO:0003824
Lan16g0968 445 SUPERFAMILY PLP-dependent transferases 36 434 IPR015424 -
Lan16g0968 445 MobiDBLite consensus disorder prediction 1 25 - -
Lan16g0968 445 PANTHER L-CYSTEINE DESULFHYDRASE 2 444 - -
Lan16g0968 445 PANTHER ISOPENICILLIN N EPIMERASE-LIKE PROTEIN 2 444 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan16g0968 Lan-Chr16 16753819 16757112 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan16g0968 K22207 - gmx:100793745 736.873
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan16g0968 16 16753819 16757112 Lan20g0596 20 4664866 4668971 PCT
Lan20g0596 20 4664866 4668971 Lan16g0968 16 16753819 16757112 PCT