Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan20g0514 ATGACTTTCTCTCTTTTCTTCGCCACTTTTCTCTCTCTTTTCTTCACTCTTCTTCTTCATTGTAATGCATTCCCAACCCATTATCACAGTCCTCACCCTCACTTTGCCACTCATAACTACAAAGATGCTCTCACAAAATCTATACTCTTCTTTGAAGGCCAGAGGTCAGGGAAGCTTCCTTCTAACCAGAGAATGTCTTGGAGGAAGGACTCTGCTCTCTCTGATGGCTCAACCATGCATGTTGATTTGGTTGGAGGGTACTATGATGCTGGTGACAATGTCAAGTTTGGTTTTCCTATGGCTTTTACTACTACTATGCTTTCTTGGAGTGTTATTGAGTTTGGTGGGTTAATGAAAAATGAGTTGCAGAATGCTAGAGAGGCTATTCGGTGGGGTACTGATTATCTTCTCAAAGCCACTGCTCATCCCAACACCATTTATGTTCAGGTGGGAGAGGCTACAAAGGACCATGCTTGTTGGGAGAGACCAGAGGACATGGACACTCCAAGAAGTGTGTTCAAGATAGATGCAAATAATCCTGGTTCAGAAGTGGCTGCGGAAACTGCTGCAGCTCTTGCAGCCGCTTCTCTTGTTTTCAGAAGAAGTGACCCCACTTACTCCAAACTTTTACTCAGCAGGGCTATCAGGGTCTTTCAGTTTGCTGATAAATACAGAGGAACCTACAGCAATGTCTTGAAGACTATTGTGTGTCCCTTCTATTGTGATTACTCTGGTTATCAGGATGAGCTATTGTGGGGTGCTGCTTGGCTGCATAAGGCTACCAAAAATCCATTGTACCTAAACTACATTCAAGTTAATGGAAAGATACTTGGAGCTGCTGATTTTGACAATACCTTTGGGTGGGATAACAAGCATGTTGGAGCAAGGATACTTCTTTCCAAGGAATTCCTTATTGAAAAGGTACAATCCTTGCGTGATTACAAGGGTCATGCAGACAATTTCGTTTGTTCTCTAATTCCTGGAGCATCTTTCTCTTCTACCCAATATACCCCTGGTGGACTATTGTTCAAGATGAGTGATAGCAACATGCAGTATGTAACGTCCACCTCCTTCCTATTGTTAACATATGCCAAATATTTGACCGCATCCCATATGAAAGTAAACTGTGGTGGAACCACAGTAACCCCAAGGACACTCATAACAATTGCCAAGAAACAGGTGGATTACTTGCTAGGAGACAATCCTTTGAGGATGTCCTACATGGTGGGGTATGGTCCAAGGTACCCAAGAAGGATACACCACAGGGGTTCATCTCTACCGTCCATTGCAGTACACCCTGAGAAGATCCAATGTTCAGCAGGCTTCAGTGTAATGAACTCACAATCCCCCAATCCTAATATTCTAGTTGGTGCAGTTGTTGGTGGACCTGACCTGCATGATAGGTTCCCAGATGAACGGTCAGATTATGAGCAATCAGAGCCAGCAACTTATATTAATGCACCCCTTGTGGGATCATTGACTTATCTTGCACACTCATTTGGTCAACTATAA 1512 0.4345 MTFSLFFATFLSLFFTLLLHCNAFPTHYHSPHPHFATHNYKDALTKSILFFEGQRSGKLPSNQRMSWRKDSALSDGSTMHVDLVGGYYDAGDNVKFGFPMAFTTTMLSWSVIEFGGLMKNELQNAREAIRWGTDYLLKATAHPNTIYVQVGEATKDHACWERPEDMDTPRSVFKIDANNPGSEVAAETAAALAAASLVFRRSDPTYSKLLLSRAIRVFQFADKYRGTYSNVLKTIVCPFYCDYSGYQDELLWGAAWLHKATKNPLYLNYIQVNGKILGAADFDNTFGWDNKHVGARILLSKEFLIEKVQSLRDYKGHADNFVCSLIPGASFSSTQYTPGGLLFKMSDSNMQYVTSTSFLLLTYAKYLTASHMKVNCGGTTVTPRTLITIAKKQVDYLLGDNPLRMSYMVGYGPRYPRRIHHRGSSLPSIAVHPEKIQCSAGFSVMNSQSPNPNILVGAVVGGPDLHDRFPDERSDYEQSEPATYINAPLVGSLTYLAHSFGQL* 504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan20g0514 503 Pfam Glycosyl hydrolase family 9 40 492 IPR001701 GO:0004553|GO:0005975
Lan20g0514 503 ProSitePatterns Glycosyl hydrolases family 9 (GH9) active site signature 2. 396 422 IPR018221 -
Lan20g0514 503 SUPERFAMILY Six-hairpin glycosidases 37 501 IPR008928 GO:0005975
Lan20g0514 503 PANTHER ENDOGLUCANASE 17 8 503 - -
Lan20g0514 503 Gene3D - 35 503 IPR012341 GO:0005975
Lan20g0514 503 PANTHER ENDO-1,4-BETA-GLUCANASE 8 503 - -
Lan20g0514 503 ProSitePatterns Glycosyl hydrolases family 9 (GH9) active site signature 3. 469 487 IPR033126 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan20g0514 Lan-Chr20 3806996 3810332 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan20g0514 9 499 Glycoside Hydrolase AT1G02800 74.545 0.0 745
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan20g0514 K01179 - gmx:100777718 900.197
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan16g0927 16 16285437 16289717 Lan20g0514 20 3806996 3810332 PCT
Lan20g0514 20 3806996 3810332 Lan16g0927 16 16285437 16289717 PCT