Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan16g0927 ATGACTTTTTTCCTTTCTTCTTCTTCACCACCTTCTCTCATTTTCCTTCTTTTTCTCATTTCCACCATTTTCCTCCATTGTTACTCTTTCAATGACCCTGCCCATTATCATCAACCTTCACACCATCACCCTCCTCACTTTGCTGCTCATGACTACAAAGATGCTTTCACCAAATCTATCCTCTTTTTTCAAGGCCAGAGATCAGGGAAGCTTCCTCACAATCAGAGAATTTCTTGGAGGAGTGACTCTGGTCTCTCTGATGGCTCAGCTATGAATGTTGATTTGGTTGGAGGGTACTATGATGCAGGGGACAATGTCAAATTTGGTTTTCCCATGGCCTTCACCACCACTATGCTTTCATGGAGTGTTATTGAGTTTGGAGGGATAATGAAAGGTGAATTGGAAAATGCCAGAGAGGCTATTCGTTGGGGTTCTGATTATCTTCTCAAAGCAACTGCACATCCAGACACCATTTATGTCCAGGTGGGAGATGCTAAGAAGGACCATGCTTGTTGGGAAAGACCTGAGGACATGGATACCCCAAGAAATGTGTATAAGATAGACAAGAATACCCCTGGTTCAGAGGTGGCAGCAGAAACTGCTGCAGCTCTTGCAGCTGCTTCTTTGGTTTTCAAGAAAACTGACCCCATTTACTCCAAAATTTTAGCTAGGAGAGCTATTAGTGTTTTTCAGTTTGCTGATAAATACAGAGGTTCCTACAGTGATGGCTTAAAACCCATTGTATGCCCCTTTTATTGCTCTTACTCAGGTTATGAGGATGAGCTCTTATGGGGTGCTGCTTGGCTGCATAAGGCTACAAAGAATCAAATGTACCTAAACTACATTAAGGTTAATGGACAAACACTTGGGTCTGCAGAGTTTGACAATACATTTGGGTGGGATAACAAGCATGTTGGAGCAAGGATACTTCTTTCTAAGGCATTTCTTGTTCAAAAGGTGACTACCCTTCATGACTATAAGGGTCATGCTGATAACTTTATTTGTTCTGTTATTCCTGGGGCCTCTTTTTCTTCAACACAATATACCCCAGGTGGACTTTTATTCAAGATGAATGATAGCAACATGCAATATGTAACATCAACATCATTTTTGCTCTTAACTTATGCTAAATACTTAACATCAGCTCATATGGCTGTGAACTGTGGTGGAACCATTATAACCCCAAAGAGCCTAAGAGCAATGGCCAAAAAACAGGTGGATTACTTGCTAGGAGACAACCCCTTAGAGATGTCCTACATGGTAGGGTATGGCCCAAAGTACCCACAAAGGATACACCATAGAGGGTCATCTCTACCTTCAATTTCTGAACACCCTAGAAAGATCCAATGCTCAGAAGGATTCAATATTATGAACTCACAATCACCCAACCCCAACATTCTAGTTGGTGCCATAGTTGGAGGACCAGACCAATATGATAGGTTCCCTGATGTAAGGTCAGATTATGAACAATCAGAACCAGCCACTTATATGAATGCACCCTTAGTAGGAGCCCTTGCTTATCTTGCACACTCTTTTGGCCAACTCTAG 1548 0.4199 MTFFLSSSSPPSLIFLLFLISTIFLHCYSFNDPAHYHQPSHHHPPHFAAHDYKDAFTKSILFFQGQRSGKLPHNQRISWRSDSGLSDGSAMNVDLVGGYYDAGDNVKFGFPMAFTTTMLSWSVIEFGGIMKGELENAREAIRWGSDYLLKATAHPDTIYVQVGDAKKDHACWERPEDMDTPRNVYKIDKNTPGSEVAAETAAALAAASLVFKKTDPIYSKILARRAISVFQFADKYRGSYSDGLKPIVCPFYCSYSGYEDELLWGAAWLHKATKNQMYLNYIKVNGQTLGSAEFDNTFGWDNKHVGARILLSKAFLVQKVTTLHDYKGHADNFICSVIPGASFSSTQYTPGGLLFKMNDSNMQYVTSTSFLLLTYAKYLTSAHMAVNCGGTIITPKSLRAMAKKQVDYLLGDNPLEMSYMVGYGPKYPQRIHHRGSSLPSISEHPRKIQCSEGFNIMNSQSPNPNILVGAIVGGPDQYDRFPDVRSDYEQSEPATYMNAPLVGALAYLAHSFGQL* 516
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan16g0927 515 PANTHER ENDO-1,4-BETA-GLUCANASE 21 515 - -
Lan16g0927 515 ProSitePatterns Glycosyl hydrolases family 9 (GH9) active site signature 2. 408 434 IPR018221 -
Lan16g0927 515 Pfam Glycosyl hydrolase family 9 52 505 IPR001701 GO:0004553|GO:0005975
Lan16g0927 515 PANTHER ENDOGLUCANASE 17 21 515 - -
Lan16g0927 515 Gene3D - 47 515 IPR012341 GO:0005975
Lan16g0927 515 SUPERFAMILY Six-hairpin glycosidases 49 513 IPR008928 GO:0005975
Lan16g0927 515 ProSitePatterns Glycosyl hydrolases family 9 (GH9) active site signature 3. 481 499 IPR033126 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan16g0927 Lan-Chr16 16285437 16289717 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan16g0927 1 511 Glycoside Hydrolase AT1G02800 72.211 0.0 753
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan16g0927 K01179 - gmx:100777718 861.677
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan16g0927 16 16285437 16289717 Lan20g0514 20 3806996 3810332 PCT
Lan20g0514 20 3806996 3810332 Lan16g0927 16 16285437 16289717 PCT