Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan1g2084 ATGGCTCAAGCAATGGCTTCAATGACTAGTTTCAATGTTTGTAGCAATGGTAATAAAGTAAATTCAGGTACACGTTTCATAGTTAGAGCTCACAATGTTGTTGAACCACAAACTAGTAGAAGAGGAGTTATTGGTCTTGTTGCTACTACTTTGGTAACTGGATCATTTGTTCAAGCTGTTCTTGCTGATGCTATTCCTATCAAAGTTGGACCTCCTCCTCCACCCTCTGGCGGACTTCCTGGAACATTGAACTCAGATGAAGCAAGAGACCTTGATCTTCCATTGAAACAAAGGTTCTTCATTCAACCATTGACTCCCAATGAGGCTGCACAAAGGACAAAGGAATCAGCCAAGGAAATTGTTGCTGTCAAGAAGTTCATCGAGAAGAAGGCTTGGCCTTTTGTTCAGAACGATCTGCGTCTTAGGGCCGAGTATCTTCGCTATGACCTTAACACTATCATCTCTTCCAAGCCGAAAGAAGAGAAGCAATCCCTCAAGGAACTTGCTGGAAAACTTTTCCAAGATATCAACAATTTGGATTATGCAGCAAAAGTTAAGAGTTCTCCAGAAGCAGAGAAGTACTATGCTGAGACTGTATCTACTTTGAATGATGTTCTTGCCAAATTTGTGTAA 633 0.4107 MAQAMASMTSFNVCSNGNKVNSGTRFIVRAHNVVEPQTSRRGVIGLVATTLVTGSFVQAVLADAIPIKVGPPPPPSGGLPGTLNSDEARDLDLPLKQRFFIQPLTPNEAAQRTKESAKEIVAVKKFIEKKAWPFVQNDLRLRAEYLRYDLNTIISSKPKEEKQSLKELAGKLFQDINNLDYAAKVKSSPEAEKYYAETVSTLNDVLAKFV* 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan1g2084 210 SUPERFAMILY Oxygen-evolving enhancer protein 3, 99 209 IPR023222 -
Lan1g2084 210 Gene3D - 63 209 IPR023222 -
Lan1g2084 210 PANTHER OXYGEN-EVOLVING ENHANCER PROTEIN 3-1, CHLOROPLASTIC 8 208 - -
Lan1g2084 210 PANTHER OXYGEN-EVOLVING ENHANCER PROTEIN 3-1, CHLOROPLASTIC 8 208 IPR008797 GO:0005509|GO:0009523|GO:0009654|GO:0015979|GO:0019898
Lan1g2084 210 Pfam Oxygen evolving enhancer protein 3 (PsbQ) 24 208 IPR008797 GO:0005509|GO:0009523|GO:0009654|GO:0015979|GO:0019898
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan1g2084 Lan-Chr1 36088819 36090430 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan1g2084 K08901 - gmx:100499794 285.034
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan12g0116 12 1338336 1340442 Lan1g2084 1 36088819 36090430 LSH