Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan12g0116 ATGGCACAAGCAATGGCTAGCTTTTGTGGTTCAACAACAACAACAAGGTTGAATTTGTGTAGCAATGGTAAAAGGGTTACTTCAGTTACAAGTTTCATAGTTAGAGCTCAAAATGTTGATAAGGCACAAAGTAGTAGAAGAGAAGTTATTGGTCTTGTTGCTACTGGTTTGTTAACTGGATCATTTGTTCAAGGTGTTCTTGCTGATGCTATTCCTATCAAAATTGGACCTCCTCCACCACCTTCCGGCGGACTTCCTGGAACATTGAACTCAGATGAAGCAAGAGACCTTGAACTTCCATTGAAACAAAGGTTCTTCCTTCAACCATTGACTCCAAGTGAAGCAGCACAAAGAACAAAGGAATCAGCCAAGGAAATTGTTGCTGTCAAGAAGTTCATAGAGAAGAAAGCTTGGCCTTCTGTTCAGAATGATCTTCGTCTAAGGGCCGAGTATCTTCGCTACGATCTTAACACAATCATCTCTTCCAAGCCCAAGGAGGAGAAGCAATCACTCAAGGAGCTTACTGGAAAACTTTTCAAAGATATCAACAATTTGGATTATGCAGCAAAAGTTAAGAGCAGTTCAGATGCAGAGAAGTACTATGCTGAGACAGTTTCTACTCTGAATGATGTTCTTGCCAAAATTGGTTAA 651 0.404 MAQAMASFCGSTTTTRLNLCSNGKRVTSVTSFIVRAQNVDKAQSSRREVIGLVATGLLTGSFVQGVLADAIPIKIGPPPPPSGGLPGTLNSDEARDLELPLKQRFFLQPLTPSEAAQRTKESAKEIVAVKKFIEKKAWPSVQNDLRLRAEYLRYDLNTIISSKPKEEKQSLKELTGKLFKDINNLDYAAKVKSSSDAEKYYAETVSTLNDVLAKIG* 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan12g0116 216 PANTHER OXYGEN-EVOLVING ENHANCER PROTEIN 3-1, CHLOROPLASTIC 12 216 - -
Lan12g0116 216 Pfam Oxygen evolving enhancer protein 3 (PsbQ) 27 216 IPR008797 GO:0005509|GO:0009523|GO:0009654|GO:0015979|GO:0019898
Lan12g0116 216 SUPERFAMILY Oxygen-evolving enhancer protein 3, 105 215 IPR023222 -
Lan12g0116 216 Gene3D - 69 216 IPR023222 -
Lan12g0116 216 PANTHER OXYGEN-EVOLVING ENHANCER PROTEIN 3-1, CHLOROPLASTIC 12 216 IPR008797 GO:0005509|GO:0009523|GO:0009654|GO:0015979|GO:0019898
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan12g0116 Lan-Chr12 1338336 1340442 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan12g0116 K08901 - gmx:100499794 281.567
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan12g0116 12 1338336 1340442 Lan1g2084 1 36088819 36090430 LSH