Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan1g2071 ATGGCGACTGTTAACCCTTTTGATTTGTTGGATGATGACGTCGATGACCCTTCTCTGCTCATTGCGGCTGAGCAACTTAAGGCTGCGGCGGCAGCGGCGGCGGCGGCTCCCAAGAAGGAAAAGGCGGGTGGTCGTGGTGCTCTCACGGCGGCTCAGTTGCCTTCTAAACCGCTACCACCTTCTCAGGCTGTGAGGGAGGCAAGAAATGAAACTTCTAATGGCAGTCGTGGAGGTGGCCGAGGCGGACATTTTTACGGAGGTGGCCGAGGCGGACGTGGTTATGGCCGTGACTCTCCCAATGGTGAGAACTCTTTACCTGCCTCTAGAACCCCAGCTAATCAGGGCGCTTTTGAAGGAGATGCTGGGAACCCCTCAGAAAGACGCGGTTATGGTGCACCTCGTGGGCCTTATCGTGGCGGCCGTCGGGGAGGTTTCAGCAATGGTGAAGTTGATGAGGAAGGACGCCCACGAAGAGCATTTGAACGCCGCAGTGGAACTGGACGCGGAAATGAAGTTAAACGTGAAGGCTCTGGACGAGGGAACTGGGGATCCCAGACTGATGAATCTGCTCAGGTGACTGAGGAAGGGGTGAATGAAACAGAAAAGAATTTGAGCGATGAGAAGCCTGCCAGCGATGAAGATGCTGCAGCTGGAAAGAAGGAGAATCTTGCAAATGAAAATGAAGAAAAGGAGCCGGAAGATAAGGAGATGACACTGGAGGAATATGAGAAAGTGCTGGAAGAGAAAAGGAAGACCTTAGAAGCACTCAAAACTGAAGAGAGAAAGGTCGATGTTAAGGAATTTGAATCCCTGAAGCCACTCCCAAGCAAGAAAGACAATGATGAAATCTTTGCTAAATTGGGATCCGACAAGGATAAGCACAAAGATGCTATTGAGAAGGAGAAATCCAAGAAGTCTGTGAGCATCAACGAGTTTCTGAAGCCTGCTGAAGGAGAGAGGTACTACAATCCAGGTGGACGAGGTAGAGGTGGTCGCGGCCGTGGTGGTTTCAGAGGCGGTTACAACGGAAATACGAGCAGCAAAGGACCAGCACCAGCAATTGAGGATCCTGGTCAGTTCCCAACCTTGGGTGGTGGCAAGTGA 1104 0.5181 MATVNPFDLLDDDVDDPSLLIAAEQLKAAAAAAAAAPKKEKAGGRGALTAAQLPSKPLPPSQAVREARNETSNGSRGGGRGGHFYGGGRGGRGYGRDSPNGENSLPASRTPANQGAFEGDAGNPSERRGYGAPRGPYRGGRRGGFSNGEVDEEGRPRRAFERRSGTGRGNEVKREGSGRGNWGSQTDESAQVTEEGVNETEKNLSDEKPASDEDAAAGKKENLANENEEKEPEDKEMTLEEYEKVLEEKRKTLEALKTEERKVDVKEFESLKPLPSKKDNDEIFAKLGSDKDKHKDAIEKEKSKKSVSINEFLKPAEGERYYNPGGRGRGGRGRGGFRGGYNGNTSSKGPAPAIEDPGQFPTLGGGK* 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan1g2071 367 Pfam Hyaluronan / mRNA binding family 156 263 IPR006861 -
Lan1g2071 367 SMART HABP4_PAI_RBP1_2 156 264 IPR006861 -
Lan1g2071 367 MobiDBLite consensus disorder prediction 179 198 - -
Lan1g2071 367 MobiDBLite consensus disorder prediction 145 175 - -
Lan1g2071 367 Coils Coil 239 266 - -
Lan1g2071 367 PANTHER HYALURONIC ACID-BINDING PROTEIN 4 1 366 IPR039764 GO:0003723
Lan1g2071 367 MobiDBLite consensus disorder prediction 30 239 - -
Lan1g2071 367 MobiDBLite consensus disorder prediction 318 367 - -
Lan1g2071 367 PANTHER NUCLEAR RNA-BINDING-LIKE PROTEIN 1 366 - -
Lan1g2071 367 Pfam Stm1 1 78 IPR019084 -
Lan1g2071 367 Gene3D - 154 267 - -
Lan1g2071 367 MobiDBLite consensus disorder prediction 199 239 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan1g2071 Lan-Chr1 35915283 35919912 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan1g2071 K13199 - gmx:100791259 410.609
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan1g0940 1 20070601 20074376 Lan1g2071 1 35915283 35919912 LSH
Lan1g2071 1 35915283 35919912 Lan8g0077 8 1097038 1101161 PCT