Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan1g0940 ATGGCCACTGCCAACCCTTTTGATTTGTTGGGTGATGACGTCGACGACCCATCCCACTTCATCCTGGCTGAGCAACTCAAGGCTGCTACGGTGGCTCCGAACAAGGATTCCGCTCCGGCCGCCGCTCGTCGTGCTCCTCAGTTGCCCTCCAAACCCCTCCCACCTTCTCAGGCTGTGAGGGAGGCAAGAAATGAAACTTCTTATGGCGGCCGTGGAGGTAGCCGAGGTGGCCGTGGGTATGGAGGTAGCCGAGGTGGTCGTGGGTATGGAGGTGGCCGAGGTGGTCGTGACTCTCCCAATGATGAGAGCTCCTTCTCTGACTATAAAGCCCCAGCTCAAGGTGCTTTTCAAGAAAGTGATGCTGGCAACCCCTCAGAAAGACGTGGTTACAGTGGACCTCGTGGGCCTTATCGTGGTAACCGTCGGGGAGGTTTCAGCAATGGTGATGTTGAGGAAGGACGCCCACAAAGAACATTTGAACGCCGCAGTGGGACTGGACGCGGAAATGAAGTCAAACGTGAAGGCTCTGGACGAGGGAACTGGGGATCACAGACTGATGAATTTGCTCAGGTGTCTGAGGAAGTGGTGAATGAAAATGAAAAGAATTTGAGTGATGAGAAGCCTGCAGGTGAGGAAGATGCAGCAGATGGAAAGGAGAGTCCTGCTAATGAAAATGCAGAGAAGGAGCCTGAAGATAAGGAAATGACACTGGAGGAATATGAGAAAGTGCTGGAAGAGAAAAGGAAAGCCTTAGAAGCACTCAAAACTGAAGAGAGAAAGGTGGATATTAGGGAGTTTGAATCCTTGAAGCCACTGTCAAGCAAGAAAGACAACGATGAAATCTTTGCTAAATTGGGATCTGACAAGGATAAACGCAAGGATGCTTTCGAGAAGGAGAAATCCAAGAAGTCTGTCAGCATTAATGAGTTTCTGAAGCCTGCTGAAGGAGAGAGGTACTACGGTGGGCGTGGTAGGGGACGTGGACGTGGTGGTTCCAGAGGAGGTTACAGTGGAAATGTAAGCCGCAACGTACCAGCTCCAGCCATTGAGGATCCTGGTCAGTTCCCAACCTTGGGTGGTGGCAAGTGA 1089 0.5161 MATANPFDLLGDDVDDPSHFILAEQLKAATVAPNKDSAPAAARRAPQLPSKPLPPSQAVREARNETSYGGRGGSRGGRGYGGSRGGRGYGGGRGGRDSPNDESSFSDYKAPAQGAFQESDAGNPSERRGYSGPRGPYRGNRRGGFSNGDVEEGRPQRTFERRSGTGRGNEVKREGSGRGNWGSQTDEFAQVSEEVVNENEKNLSDEKPAGEEDAADGKESPANENAEKEPEDKEMTLEEYEKVLEEKRKALEALKTEERKVDIREFESLKPLSSKKDNDEIFAKLGSDKDKRKDAFEKEKSKKSVSINEFLKPAEGERYYGGRGRGRGRGGSRGGYSGNVSRNVPAPAIEDPGQFPTLGGGK* 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan1g0940 362 SMART HABP4_PAI_RBP1_2 155 262 IPR006861 -
Lan1g0940 362 PANTHER NUCLEAR RNA-BINDING-LIKE PROTEIN 1 361 - -
Lan1g0940 362 MobiDBLite consensus disorder prediction 145 174 - -
Lan1g0940 362 Pfam Hyaluronan / mRNA binding family 155 261 IPR006861 -
Lan1g0940 362 Gene3D - 153 265 - -
Lan1g0940 362 Coils Coil 237 264 - -
Lan1g0940 362 PANTHER HYALURONIC ACID-BINDING PROTEIN 4 1 361 IPR039764 GO:0003723
Lan1g0940 362 MobiDBLite consensus disorder prediction 29 236 - -
Lan1g0940 362 MobiDBLite consensus disorder prediction 178 197 - -
Lan1g0940 362 MobiDBLite consensus disorder prediction 198 236 - -
Lan1g0940 362 Pfam Stm1 1 73 IPR019084 -
Lan1g0940 362 MobiDBLite consensus disorder prediction 317 362 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan1g0940 Lan-Chr1 20070601 20074376 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan1g0940 K13199 - gmx:100805110 396.741
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan1g0940 1 20070601 20074376 Lan1g2071 1 35915283 35919912 LSH
Lan1g0940 1 20070601 20074376 Lan8g0077 8 1097038 1101161 PCT