Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan1g1527 ATGGCAGCTGAACTAGTGAGTGCTGCCACAACTGGAAAACTTGTTGAAATTGATTGGATGAAAAATATTGCAATTTGTGAATTAGTTGCTCATGATCACAGGCAAGCTAAAGATGTTGTTAAAGCTATAAAAAAGAGACTGGGTAACAAAAAACCCAATACTCAACTTTATGCAGTCATGTTGTTGGAAATGCTTATGAACAATATTGGAGATCATATTCACCAGCAGGTGATTGATACAGGAATAATTCCTATTCTTGTGAAAATTGTGAAGAAAAAGTCGGATTTCCCTGTACGGGAGCGTATATTTCTCCTACTTGATGCTGCACAAACATCAGTTGGTGGTGCTTCTGGAAAGTTTCCGCAGTATTATAATGCATATTATGATTTGGTGAGTGCTGGAGTGCAGTTTCCTCAAAGGGCTCAAGTTGTCCAATCAAACTGTCCTAGTTCACAGCCTAATAGGACTAATAATGTACCGAAGAGGGAGTACGCCTTGCCTAGCCATGGAGAGGTTGCTCAGCCAGCAGAGTCCCGAACTGTTCCTGGATCTAGCATTATTCAAAAGGCTAGTGATGTATTGGAAGTTCTAAAAGAAGTTCTTGATGCTGTTGATGCCCAACATTCTCAGGGAGGCAGGGACGAGTTCACCCTTGACCTTGTCGAACAATGTTCATTTCAGAAGCAAAGGGTAATGCATCTTGTAATGGCTTCTAGAGATGAGAGGATAGTTTCTAAAGCAATTGAATTGAATGAACAGCTTCAGCAAGTTCTTGCAAGACATGATGATATGCTTTCTGCCAAAGCTACAACAACTGCTAATCACTTTGGCCATGAAGATGAGGAAGAAGAACCCGAACAATTGTTCCTAAGATTACGCAAAGGAAAGGCGCATGCAAGACCTGAAGATGAAGAGGCTGAACCCGAGTTCCCTCACCTGGGTTTGCTTGAAGAGAGACTTAACCGTCCACTAATACGACCCCTCTCGTTGAGTCCATCTCGACTAGTTAATACTCGTCCTGCACCTGCTGTAATTCCTCCTCCAAGTACAAGGCAGAACAGCGAGCTTCCTCATGTAGCCATTCCACCACCGCCGGCAAAGCACATCGAGAGGGAGAGATTTTTTCAGGAAAATAAGAAAGGCAGTGCAACCTTAGGTGGCCACCTAAGAGGCCTCTCCTTGAATAGTCACAATGGTAGCAGCTCTCATAGTGGTAGCCTTGATTTTAGTGACTGGTCTCTTTAG 1245 0.4321 MAAELVSAATTGKLVEIDWMKNIAICELVAHDHRQAKDVVKAIKKRLGNKKPNTQLYAVMLLEMLMNNIGDHIHQQVIDTGIIPILVKIVKKKSDFPVRERIFLLLDAAQTSVGGASGKFPQYYNAYYDLVSAGVQFPQRAQVVQSNCPSSQPNRTNNVPKREYALPSHGEVAQPAESRTVPGSSIIQKASDVLEVLKEVLDAVDAQHSQGGRDEFTLDLVEQCSFQKQRVMHLVMASRDERIVSKAIELNEQLQQVLARHDDMLSAKATTTANHFGHEDEEEEPEQLFLRLRKGKAHARPEDEEAEPEFPHLGLLEERLNRPLIRPLSLSPSRLVNTRPAPAVIPPPSTRQNSELPHVAIPPPPAKHIERERFFQENKKGSATLGGHLRGLSLNSHNGSSSHSGSLDFSDWSL* 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan1g1527 414 PANTHER TOM1-LIKE PROTEIN 1 411 IPR044836 GO:0035091|GO:0043130|GO:0043328
Lan1g1527 414 SUPERFAMILY GAT-like domain 143 266 - -
Lan1g1527 414 SMART VHS_2 2 134 IPR002014 GO:0035091|GO:0043130
Lan1g1527 414 Pfam VHS domain 5 109 IPR002014 GO:0035091|GO:0043130
Lan1g1527 414 SUPERFAMILY ENTH/VHS domain 4 140 IPR008942 -
Lan1g1527 414 Pfam GAT domain 195 265 IPR004152 GO:0035091|GO:0043130
Lan1g1527 414 Coils Coil 187 207 - -
Lan1g1527 414 CDD VHS 2 130 - -
Lan1g1527 414 Gene3D - 183 274 IPR038425 -
Lan1g1527 414 ProSiteProfiles GAT domain profile. 178 266 IPR004152 GO:0035091|GO:0043130
Lan1g1527 414 ProSiteProfiles VHS domain profile. 9 138 IPR002014 GO:0035091|GO:0043130
Lan1g1527 414 PANTHER ENTH/VHS/GAT FAMILY PROTEIN 1 411 - -
Lan1g1527 414 Gene3D - 2 136 IPR008942 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan1g1527 Lan-Chr1 25743929 25749691 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan1g1527 - - gmx:100785131 568.155
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan1g1527 1 25743929 25749691 Lan15g0481 15 11275064 11280714 PCT
Lan15g0481 15 11275064 11280714 Lan1g1527 1 25743929 25749691 PCT