Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan1g1486 ATGACCATGAACCGCGATTCTTGGGTTTTTCTTTTCGGCCTTATAGGCAACATCATCTCCTTTATGGTGTTCCTTAGTCCAATTCCAACTTTTTATCAAATTTACAAGAAGAAAACTTCTGAAGGGTACCAATCACTTCCCTATGTTGTTGCACTCCTCAGTGCAATGCTTTGGATTTACTATGCATTGGTAAAAAAGGACTCTGCACTTCTTCTCATAACCATTAACACCTTTGGAATTGTTGTGGAGTCTTCTTACCTTGCATTCTTCCTATTTTATTCCTCAAAGAAGGCTAGGCTTTCCACCATCAAGCTTCTTCTTTTGTTGAATGTGTTTGGCTATGGAGCCATGCTTCTAGCTACTCTCTACTTGTCCAAGGGAGCAAAGCGTCTTGCTATTATAGGATGGATTTGTTTGGTTTTCAACATAACTGTATTTGCTGCACCTCTCTTCATCATGAAAAAAGTCATAACAACAAGGAGCGTGGAATACATGCCCTTCACTTTGTCCTTCTTTTTAACAATCAATGCTGTTATGTGGTTCTTCTATGGCCTTTTCCAAAGGGACTATTATATTGCTCTCCCAAATACACTTGGGTTTCTGTTCGGTATAGTTCAGATGGTGTTGTATTTGATGTACAGAAACGCCACACCAGTGGTAAAAGAGAATCCAATGAAAGTTCAAGAATTGAATGGCCATATTGTTGATGTTGAGAAGGTGCATGATGGAGCAAGAGGTGGTGCTATTGGCAAAGTCTGA 759 0.3966 MTMNRDSWVFLFGLIGNIISFMVFLSPIPTFYQIYKKKTSEGYQSLPYVVALLSAMLWIYYALVKKDSALLLITINTFGIVVESSYLAFFLFYSSKKARLSTIKLLLLLNVFGYGAMLLATLYLSKGAKRLAIIGWICLVFNITVFAAPLFIMKKVITTRSVEYMPFTLSFFLTINAVMWFFYGLFQRDYYIALPNTLGFLFGIVQMVLYLMYRNATPVVKENPMKVQELNGHIVDVEKVHDGARGGAIGKV* 253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan1g1486 252 Gene3D - 129 224 - -
Lan1g1486 252 Gene3D - 10 99 - -
Lan1g1486 252 PANTHER RAG1-ACTIVATING PROTEIN 1 5 240 - -
Lan1g1486 252 Pfam Sugar efflux transporter for intercellular exchange 11 97 IPR004316 GO:0016021
Lan1g1486 252 Pfam Sugar efflux transporter for intercellular exchange 133 216 IPR004316 GO:0016021
Lan1g1486 252 PANTHER BIDIRECTIONAL SUGAR TRANSPORTER SWEET 5 240 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan1g1486 Lan-Chr1 24976085 24979031 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan1g1486 1 239 Miscellaneous Gene Families AT5G50800 52.720 2.26e-91 270
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan1g1486 K15382 - gmx:100805676 406.371
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan1g1486 1 24976085 24979031 Lan1g1486 1 24976085 24979031 ECH
Lan12g0754 12 14772116 14773964 Lan1g1486 1 24976085 24979031 LSH