Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lan12g0754 | ATGGCTCATGACACTCCTATAATTTTTGCCGTTGGTGTTCTAGGTAACATTGCCTCCTTCATTTGCTTTCTAGCACCAGTGTCAACATTCTATCGAGTTTGTAAGAAGAAAACAACCGAAGGGTTTCAATCAGTTCCATATGTGGCAGCACTCTTCTGTTCAATGCTTTGGATATTTTATGCCTACATTAAGAAGGGTGAAATACTTATTATAACCATCAATTCATTTGGTTGTTTTATAGAGACAATTTACCTTGCCATCTATATCACTTATTGCCCTAAGAAAGCCAGGATGTTCACATTGAAGTTGATTTTCTTGTTCAACTTGGGAGGGATTTTCTTGATTATCCTTCTAACACACGTCCTTGCAAAAGAAAGAGCAGCACGACTAGAGATTCTTGGATGGATTTGTGTAGTCCTTTCTACCAGTGTTTTCGCAGCACCTTTAAGCATAATTAAAGTGGTTATTCGCACCAAAAGTGTAGAGTTCATGCCTCTTCCTCTTTCAGCCCTCCTTACAATAAGCGCCATTATGTGGATGGCATATGGTATTCTTCTTAGAGATATCTATGTTACACTTCCAAACATAGTGGGTGTCACATTTGGTATTATTCAAATGGTGCTGTATGCAATGTACAGAAAACAAAAACCAGTGAAGGATCAAAAGCTGCCAGAACATAAAGGGGATATCAATGATGAAAACTTGGCTTCAACTGTGACTAATACGAACCATGAAGTGATCCCTCAGCTTGTTGAAATTGAGATTGGAGAGGAGAAGAAGGAACAGAAACAAGTTCAGGATGAACCAGAAAAGAATCAGGACCAAACTGAACGCAACAACAACATCAACAAAACAAGAGAACTAGGAGGAATTCAAGTCCAACAACAGAAGAAGGGTTGA | 900 | 0.3878 | MAHDTPIIFAVGVLGNIASFICFLAPVSTFYRVCKKKTTEGFQSVPYVAALFCSMLWIFYAYIKKGEILIITINSFGCFIETIYLAIYITYCPKKARMFTLKLIFLFNLGGIFLIILLTHVLAKERAARLEILGWICVVLSTSVFAAPLSIIKVVIRTKSVEFMPLPLSALLTISAIMWMAYGILLRDIYVTLPNIVGVTFGIIQMVLYAMYRKQKPVKDQKLPEHKGDINDENLASTVTNTNHEVIPQLVEIEIGEEKKEQKQVQDEPEKNQDQTERNNNINKTRELGGIQVQQQKKG* | 300 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lan12g0754 | 299 | PANTHER | RAG1-ACTIVATING PROTEIN 1 | 5 | 281 | - | - | |
| Lan12g0754 | 299 | MobiDBLite | consensus disorder prediction | 258 | 281 | - | - | |
| Lan12g0754 | 299 | Gene3D | - | 9 | 96 | - | - | |
| Lan12g0754 | 299 | MobiDBLite | consensus disorder prediction | 258 | 299 | - | - | |
| Lan12g0754 | 299 | Gene3D | - | 128 | 223 | - | - | |
| Lan12g0754 | 299 | MobiDBLite | consensus disorder prediction | 282 | 299 | - | - | |
| Lan12g0754 | 299 | PANTHER | BIDIRECTIONAL SUGAR TRANSPORTER SWEET | 5 | 281 | - | - | |
| Lan12g0754 | 299 | Pfam | Sugar efflux transporter for intercellular exchange | 10 | 96 | IPR004316 | GO:0016021 | |
| Lan12g0754 | 299 | Pfam | Sugar efflux transporter for intercellular exchange | 132 | 216 | IPR004316 | GO:0016021 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Lan12g0754 | Lan-Chr12 | 14772116 | 14773964 | Wgd |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Lan12g0754 | 9 | 230 | Miscellaneous Gene Families | AT5G23660 | 56.087 | 1.29e-86 | 259 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Lan12g0754 | K15382 | - | gmx:100801430 | 410.994 |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Lan12g0754 | 12 | 14772116 | 14773964 | Lan1g1486 | 1 | 24976085 | 24979031 | LSH |