Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan1g1479 ATGGGCGAGGAAGAGAAGAAACCAGCGGAAAATGGAGTGGAGGTGAAGAAAGAAGAGGAAGTTAAAGAGGAGAAGAACGAAGTAAAAGAGGAAGATAAGAAACCGGAAAAGGCGGCGGAGGAAGAGAAAAAAGCGGAGGAATCAAAAGATGGGAATGAAACGAAAGATCAACCTGCGGTGCCACCAGAGATTGTGTTGAAAGTTTTTATGCATTGTGAAGGTTGTGCTCGCAAGGTTCGTCGTTCTCTGAAAGGGTTCCCAGGAGTTGAAGATGTAATAACAGATTGCAAGAGCCACAAAGTGGTGGTTAAAGGAGAAAAAGCAGATCCACTGAAGGTTCAAGAGAGAGTGCAAAGGAAGAGCCATAGACAAGTTGAGCTTCTTTCTCCAATCCCAGAGCCACAAACCGAGGAAGAGAAAAAACCTGAAGAGGAGAAGCCAAAGCCTGAAGAGACAAAAGAAGAGCCTCAAGTTGTCACTGTTGTTCTGAATGTCCAGATGCATTGTGAAGCATGCTCCCAAGAAATCAAGCGGCGCATTGAGAAAATGAAGGGAGTTGAATCAGCTGAACCTGATCTAAAAAACTCACAAGTGAGTGTAAAGGGAGTGTTTGAGCCAGAAAAGTTGGTGGAATATGTGCAGAAGAGAACTGGAAAACAAGCAGTGATAGTGAAACAAGAGGTAGAGAAGAAAGAGGAAGCAAAAGAAGAAGCCAAAGAAGAGAAGAAAGATGAGGAAGGTGGTGACAATGATAAGAAGGGTGAAGAAGAAGAAAAGAACAAAGAGAAGAAAGAAGGTGAAGGTGAAGGAGAAGGAGGAGAGGCTAAAGAAACTGAGGTAAATGCAGAAGAAGAGACCAACAAGGTGGTGGAGCTGAAAAAGAATGAGTATTATCACAATCCATCAAGGTATGGAATGGAGTATTATCATGCTTATCCTGGTCCAGATTACCCACCTCAGATTTTCAGTGATGAGAACCCCAATGCCTGCACTGTGATGTAA 1002 0.4331 MGEEEKKPAENGVEVKKEEEVKEEKNEVKEEDKKPEKAAEEEKKAEESKDGNETKDQPAVPPEIVLKVFMHCEGCARKVRRSLKGFPGVEDVITDCKSHKVVVKGEKADPLKVQERVQRKSHRQVELLSPIPEPQTEEEKKPEEEKPKPEETKEEPQVVTVVLNVQMHCEACSQEIKRRIEKMKGVESAEPDLKNSQVSVKGVFEPEKLVEYVQKRTGKQAVIVKQEVEKKEEAKEEAKEEKKDEEGGDNDKKGEEEEKNKEKKEGEGEGEGGEAKETEVNAEEETNKVVELKKNEYYHNPSRYGMEYYHAYPGPDYPPQIFSDENPNACTVM* 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan1g1479 333 ProSiteProfiles Heavy-metal-associated domain profile. 167 215 IPR006121 GO:0046872
Lan1g1479 333 MobiDBLite consensus disorder prediction 1 62 - -
Lan1g1479 333 Coils Coil 221 248 - -
Lan1g1479 333 MobiDBLite consensus disorder prediction 104 157 - -
Lan1g1479 333 MobiDBLite consensus disorder prediction 222 290 - -
Lan1g1479 333 MobiDBLite consensus disorder prediction 133 155 - -
Lan1g1479 333 MobiDBLite consensus disorder prediction 104 123 - -
Lan1g1479 333 Coils Coil 275 295 - -
Lan1g1479 333 Gene3D - 155 224 - -
Lan1g1479 333 CDD HMA 70 126 IPR006121 GO:0046872
Lan1g1479 333 MobiDBLite consensus disorder prediction 1 56 - -
Lan1g1479 333 CDD HMA 162 221 IPR006121 GO:0046872
Lan1g1479 333 MobiDBLite consensus disorder prediction 221 290 - -
Lan1g1479 333 PANTHER HEAVY METAL-ASSOCIATED ISOPRENYLATED PLANT PROTEIN 7 1 333 IPR044577 GO:0046872
Lan1g1479 333 SUPERFAMILY HMA, heavy metal-associated domain 156 225 IPR036163 GO:0046872
Lan1g1479 333 PANTHER HEAVY METAL-ASSOCIATED ISOPRENYLATED PLANT PROTEIN 7 1 333 - -
Lan1g1479 333 Coils Coil 14 34 - -
Lan1g1479 333 SUPERFAMILY HMA, heavy metal-associated domain 65 120 IPR036163 GO:0046872
Lan1g1479 333 Gene3D - 58 133 - -
Lan1g1479 333 Pfam Heavy-metal-associated domain 66 119 IPR006121 GO:0046872
Lan1g1479 333 Pfam Heavy-metal-associated domain 163 219 IPR006121 GO:0046872
Lan1g1479 333 ProSiteProfiles Heavy-metal-associated domain profile. 70 126 IPR006121 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan1g1479 Lan-Chr1 24824472 24826348 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan1g1479 - - lang:109362245 363.614
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan1g1479 1 24824472 24826348 Lan1g1479 1 24824472 24826348 ECH
Lan12g0763 12 14872294 14874303 Lan1g1479 1 24824472 24826348 LSH
Lan1g1921 1 34458775 34460712 Lan1g1479 1 24824472 24826348 LSH