Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lan12g0763 | ATGGGCGAGGAAGAGAAGAAACCAGAAGAAAACAAAGTGGAGGAGAAGAAAGCAGAGGAAGTGAAAGAGGATAAGAAAGAAGCAAAAGAGGAAGAAAAGAAACCGGAAAAAGCGGCGGAGGAATCAAAAGATGGGAAGGAAACGAAAGATCAACAACCTGCGCCGCCGCCAGAGATTGTGCTGAAAGTGTTCATGCATTGCGAAGGTTGTGCTCGCAAGGTTCGTCGCTCCCTTAAAGGTTTTCCAGGGGTTGAAGATGTAATAACAGATTGCAAGACTCACAAGGTGGTGGTTAAAGGAGAAAAAGCAGATCCACTCAAGGTTCAAGAGAGAGTGCAGAGGAAAAGCCATAGACAAGTTGATCTTCTCTCTCCCATCCCAAAACCACAAACCGAGGAAGAGAAAAAACCTGAGGAAGAGAAGCCCAAACCCGAGGAGAAGAAAGAAGAGCCTCAGGTTATCACAGTTGTTTTCAATGTTCACATGCATTGTGAAGCTTGCTCCCAGGAAATCAAGCGGCGCATTGAGAAAATGAAAGGTGTGGAATCAGTTGAACCTGATCTGAAGAACTCACAAGTGAGCGTAAAGGGAGTGTTTGAGCCAGCAAAATTGTTAGAATATGTGCACAAGAGGACTGGGAAAAAAGCAGTAATAGTGAAGCAAGAGCCAGAGAAGAAAGAGGAACCAAAAGAAGCTGCGAAGGAAGAGAAGAAAGGTGAGGAAGGTGAGAAGGATAAGAATGGAAATGGTGAAGGAGAAGAGAACAAAGAAAAGAAAGAAGGAGAAGAAGCTAAACCAGTTGAGGGAAATGCAGAAGAAGAGATAAACAAGGTTATAGATATGAAAAGGAATGAATACTATTACAATCCACCAAGGTATGGGTTTGAGAGAGAGTACTATCATGCTTATCCTGGCCCAGCTTACCCACCTCAGATCTTCAGTGATGAGAACCCCAATGCATGCACTGTTATGTAA | 975 | 0.4369 | MGEEEKKPEENKVEEKKAEEVKEDKKEAKEEEKKPEKAAEESKDGKETKDQQPAPPPEIVLKVFMHCEGCARKVRRSLKGFPGVEDVITDCKTHKVVVKGEKADPLKVQERVQRKSHRQVDLLSPIPKPQTEEEKKPEEEKPKPEEKKEEPQVITVVFNVHMHCEACSQEIKRRIEKMKGVESVEPDLKNSQVSVKGVFEPAKLLEYVHKRTGKKAVIVKQEPEKKEEPKEAAKEEKKGEEGEKDKNGNGEGEENKEKKEGEEAKPVEGNAEEEINKVIDMKRNEYYYNPPRYGFEREYYHAYPGPAYPPQIFSDENPNACTVM* | 325 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lan12g0763 | 324 | CDD | HMA | 65 | 120 | IPR006121 | GO:0046872 | |
| Lan12g0763 | 324 | MobiDBLite | consensus disorder prediction | 1 | 57 | - | - | |
| Lan12g0763 | 324 | Gene3D | - | 150 | 219 | - | - | |
| Lan12g0763 | 324 | ProSiteProfiles | Heavy-metal-associated domain profile. | 162 | 210 | IPR006121 | GO:0046872 | |
| Lan12g0763 | 324 | MobiDBLite | consensus disorder prediction | 128 | 152 | - | - | |
| Lan12g0763 | 324 | Pfam | Heavy-metal-associated domain | 61 | 114 | IPR006121 | GO:0046872 | |
| Lan12g0763 | 324 | Pfam | Heavy-metal-associated domain | 157 | 215 | IPR006121 | GO:0046872 | |
| Lan12g0763 | 324 | MobiDBLite | consensus disorder prediction | 1 | 51 | - | - | |
| Lan12g0763 | 324 | MobiDBLite | consensus disorder prediction | 218 | 273 | - | - | |
| Lan12g0763 | 324 | MobiDBLite | consensus disorder prediction | 108 | 152 | - | - | |
| Lan12g0763 | 324 | ProSiteProfiles | Heavy-metal-associated domain profile. | 65 | 121 | IPR006121 | GO:0046872 | |
| Lan12g0763 | 324 | Gene3D | - | 56 | 128 | - | - | |
| Lan12g0763 | 324 | SUPERFAMILY | HMA, heavy metal-associated domain | 151 | 222 | IPR036163 | GO:0046872 | |
| Lan12g0763 | 324 | PANTHER | HEAVY METAL-ASSOCIATED ISOPRENYLATED PLANT PROTEIN 7 | 1 | 324 | - | - | |
| Lan12g0763 | 324 | CDD | HMA | 157 | 216 | IPR006121 | GO:0046872 | |
| Lan12g0763 | 324 | Coils | Coil | 11 | 34 | - | - | |
| Lan12g0763 | 324 | SUPERFAMILY | HMA, heavy metal-associated domain | 60 | 114 | IPR036163 | GO:0046872 | |
| Lan12g0763 | 324 | PANTHER | HEAVY METAL-ASSOCIATED ISOPRENYLATED PLANT PROTEIN 7 | 1 | 324 | IPR044577 | GO:0046872 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Lan12g0763 | Lan-Chr12 | 14872294 | 14874303 | Wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Lan12g0763 | - | - | lang:109362245 | 386.726 |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Lan12g0763 | 12 | 14872294 | 14874303 | Lan1g1921 | 1 | 34458775 | 34460712 | LSH | |
| Lan12g0763 | 12 | 14872294 | 14874303 | Lan1g1479 | 1 | 24824472 | 24826348 | LSH |