Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan1g1429 ATGTCAAAGCTTCCAAACATGTTTTCCATTAGACACGTCCTTGTTGTATCACTGGCTTTAAACATCAGCTTGATACTGAGAATTGTTTATGATAATAAATCAAGAAGCGAGGTGCCAATAACACACCGTTTGCGTCTTTCTACTTCAAATTTTGCGAATTCTACTATTACTGATCATCCAGAAGACAGAGATAGAGTCATAAATCTCGACCATGGAGATCCTAAAATGTATGAAAAATTCTGGAGAAAAATGGGTGACAAGACCACAATCACAATTCCAGGTTGGCAATCCATAAGCTATTTTTCTGAGACAACAAATATTTGCTGGTTTCTGGAGCCTGAGTTTGCAAAGGAGGTAGTGAGATTGCACAATGTGGTGGGTAATGCAGTAACAGAAGGCCGCTATATTGTTGTTGGCACTGGTTCCTCTCAGCTCATTCTGGCTGCTCTTTATGCTCTATCCTCACATGATGCAGCTGAACCAATCGATGTCGTATCCGCCGCGCCATATTACTCGTCATACCCATTAATGACAGATTTCCAGAAATCTGGCCATTACAAATGGGGTGGTGATGCAAGAAGTTTTGACAAAGATGGTCCATACATTGAGCTGGTTACTTCTCCAAACAACCCTGAAGGTCATAAAACGGGACCAGTGTTGAACCGAAGCAATGGGCTATTAATTCATGATCTTGCATATTACTGGCCACACTACACTCCAATTTCATCCCCTTCAGATCATGATATTACACTTTTCACTGTCTCCAAAAGCACTGGTCATGCAGGATTGCGAATAGGGTGGGCTCTTGTCAAGGATCAAGAGGTAGCTAAAAGAATGACAAAATTCATTGAGTTGAATACAATTGGTGTCTCAAAGGATTCTCAACTCAGGGCTGCTAAGGTTCTAAAGGTAGTATCTGATAGCACAGAAGAAGAAAACACTGAAGAGGGAAAATCATTCTTCAAGTACAGCTATGATGTCATGGAACAAAGGTGGAAGCAATTAAGAGCAGCACTTGAGGCTAATGGTTTGTTCACTGTAGCATATTTTCCTACTGGGTTCTGCACATTTTTCAATAAAAAGACAGAGAATTTACCAGCTTTTGTGTGGATGAAGTGTGAGAAAGATATAGAGAATTGTCAAAGCCTACTTCGACAGCACAAGATCCTATCAAGAGGTGGGAAGCATTTTGGAGTGAGCCAAAGATATGTTAGAGTTAGCTTGCTAGATACTAATGAAAATTTTAACCTCTTTATAGATAGACTCTCTGCTATGCAGTTGTGA 1284 0.4026 MSKLPNMFSIRHVLVVSLALNISLILRIVYDNKSRSEVPITHRLRLSTSNFANSTITDHPEDRDRVINLDHGDPKMYEKFWRKMGDKTTITIPGWQSISYFSETTNICWFLEPEFAKEVVRLHNVVGNAVTEGRYIVVGTGSSQLILAALYALSSHDAAEPIDVVSAAPYYSSYPLMTDFQKSGHYKWGGDARSFDKDGPYIELVTSPNNPEGHKTGPVLNRSNGLLIHDLAYYWPHYTPISSPSDHDITLFTVSKSTGHAGLRIGWALVKDQEVAKRMTKFIELNTIGVSKDSQLRAAKVLKVVSDSTEEENTEEGKSFFKYSYDVMEQRWKQLRAALEANGLFTVAYFPTGFCTFFNKKTENLPAFVWMKCEKDIENCQSLLRQHKILSRGGKHFGVSQRYVRVSLLDTNENFNLFIDRLSAMQL* 428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan1g1429 427 Gene3D Aspartate Aminotransferase, domain 1 317 426 IPR015422 GO:0003824
Lan1g1429 427 SUPERFAMILY PLP-dependent transferases 48 424 IPR015424 -
Lan1g1429 427 Pfam Allinase 67 425 IPR006948 GO:0016846
Lan1g1429 427 Gene3D - 51 107 IPR037029 GO:0016846
Lan1g1429 427 PANTHER BIFUNCTIONAL ASPARTATE AMINOTRANSFERASE AND GLUTAMATE/ASPARTATE-PREPHENATE AMINOTRANSFERASE-RELATED 3 426 - -
Lan1g1429 427 PANTHER TRYPTOPHAN AMINOTRANSFERASE-LIKE PROTEIN 3 426 - -
Lan1g1429 427 Gene3D - 112 315 IPR015421 GO:0003824
Lan1g1429 427 CDD AAT_like 113 422 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan1g1429 Lan-Chr1 24103754 24110605 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan1g1429 K16903 - gmx:100818522 626.32
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan1g1429 1 24103754 24110605 Lan1g1429 1 24103754 24110605 ECH
Lan12g0820 12 15323385 15331866 Lan1g1429 1 24103754 24110605 LSH