Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan12g0820 ATGTCTAAGTTTCCAACCATGTTTTCTATGAGACACTTCCTTGTTGTATCACTGGCTTTAAACGTAAGCTTGATACTAAGAATTGTTTATGATAATGAAGATAACCCAAGCAAGTATATGGGGCTGAAGAAAACGACGACGTCTGAATATGATGCTAAATCCAGAAGGGAAGTGCCTATTATACACCATTTGCGTCTTTCTACTTCAACTTTAGCCAATTCTTCTACTTGTTCTGATCATCCAGAAGACAGGGATAGAATCGTCAATCTCGATCACGGAGATCCTAAAATGTATGAAAAGTTCTGGAGAAAAATGGGTGACAAAACCACAATAACAATTCCAGGGTGGCAATCCATAAGCTATTTTTCTGATATAACAAATATTTGCTGGTTTCTAGAACCTGAATTTGCAAAGGAAGTAGTGAGGTTGCACAATGTGGTAGGTAATGCAGTTACAAAAGGTCGCTATATTGTTGTTGGCACTGGTTCCTCTCAGCTCATTCTGGCTGCTTTTTATGCTCTATCTCCACCTGATGCACCTGAACCTATCAATGTCCTATCGGCCTCGCCTTATTACTCGTCCTATCCATCAATGACAGATTTTCAGAAATCAGGCTTATACAAATGGGGTGGTGATGCTAAGAGTTTTGACAAAGATGGTCCCTACATTGAGTTGGTAACATCACCCAATAACCCTGATGGACATACAAGGCAACCAGTGGTGAACCGGAGCGATGGAATATTGATTCATGATCTTGCCTATTACTGGCCACATTACACTCCAATTTCAACCACTTCAGATCATGATATTACGCTTTTCACTGTCTCCAAAAGCACTGGTCATGCAGGAATGCGTATAGGTTGGGCTCTTGTCAAGGATCAAGAGGTAGCAAAAGGAATGACAAAATTCATTGAGCTAAATACAATTGGTGTCTCAAAGGATTCTCAACTCAGAGCTGCTAAGGTTCTAAAGCTAGTATCAGATAGTACCGAACAAGAAAAATCACAAGAGCTATCATTCTTCAAGTACAGCTATGAGATCATGGAACAAAGGTGGAAGCAGCTAAGAGCATCAGTTGAGGCCAATGGTTTGTTTACTTTACCCAATTTTCCTCCTGAATTCTGCACCTTTTTCAATAAAGAGACAGAGAATCTACCAGCTTTTGCGTGGATGAAGTGTGAGAAAGATATAGAGGATTGTCAAAGCTTCCTTGGAGAACACAGGATCCTATCAAGAGGTGGGAAGCACTTTGGAGTGAGCCAAAGATATGTTAGAGTTAGCATGCTAGATACTGATGAAAATTTTAACCTTTTTATAAATAGACTATCTGCTATGCAGATATGA 1344 0.3981 MSKFPTMFSMRHFLVVSLALNVSLILRIVYDNEDNPSKYMGLKKTTTSEYDAKSRREVPIIHHLRLSTSTLANSSTCSDHPEDRDRIVNLDHGDPKMYEKFWRKMGDKTTITIPGWQSISYFSDITNICWFLEPEFAKEVVRLHNVVGNAVTKGRYIVVGTGSSQLILAAFYALSPPDAPEPINVLSASPYYSSYPSMTDFQKSGLYKWGGDAKSFDKDGPYIELVTSPNNPDGHTRQPVVNRSDGILIHDLAYYWPHYTPISTTSDHDITLFTVSKSTGHAGMRIGWALVKDQEVAKGMTKFIELNTIGVSKDSQLRAAKVLKLVSDSTEQEKSQELSFFKYSYEIMEQRWKQLRASVEANGLFTLPNFPPEFCTFFNKETENLPAFAWMKCEKDIEDCQSFLGEHRILSRGGKHFGVSQRYVRVSMLDTDENFNLFINRLSAMQI* 448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan12g0820 447 Pfam Allinase 88 445 IPR006948 GO:0016846
Lan12g0820 447 Gene3D - 133 336 IPR015421 GO:0003824
Lan12g0820 447 CDD AAT_like 134 442 - -
Lan12g0820 447 PANTHER BIFUNCTIONAL ASPARTATE AMINOTRANSFERASE AND GLUTAMATE/ASPARTATE-PREPHENATE AMINOTRANSFERASE-RELATED 3 446 - -
Lan12g0820 447 PANTHER TRYPTOPHAN AMINOTRANSFERASE-LIKE PROTEIN 3 446 - -
Lan12g0820 447 SUPERFAMILY PLP-dependent transferases 79 444 IPR015424 -
Lan12g0820 447 Gene3D - 67 128 IPR037029 GO:0016846
Lan12g0820 447 Gene3D Aspartate Aminotransferase, domain 1 338 446 IPR015422 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan12g0820 Lan-Chr12 15323385 15331866 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan12g0820 K16903 - gmx:100818522 638.647
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan12g0820 12 15323385 15331866 Lan1g1429 1 24103754 24110605 LSH