Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan1g1072 ATGCGGCGGCGGGCTGCCGAATTTCGGCGCCCGGTTAGACGGAGAGTATCATATTGGATCTGGTTATTCATTGCCTTGTCCTCTATTCTCGGTTTGTTCTTGTTCCTTCTTCAAAATCATCATTACCATGATCCCGATGATTTTCCTTCCTTGGAGAAAAATGCAAGAGTTGAACATTTTGCTAGGGAGAGTTTGAATTTTACTGAAGAAATTACAAGTGTAAAATCATTTTCTCGGCAGTTAGCCGAACAGATGACTCTGGCGAAGGCTTATGTGGTCATTGCTAAAGAGCACAATAATCTTCATCTAGCCTGGCAGCTTAGCAAAAAGATAAGAGGATGCCAGCTTTTGCTTTCAAAAACTGCCATGACTGGGGAGCCGGTTACACAGGAGGAAGCGGAGCCAATCATTAAAAGCCTTTCTGCTCTAATATTTAAGGCACAAGATATCCATTATGACATTGCGACGACAATAGTGACTATGAAGTCGCATATTCAAGCTCTTGAAGAGCGTGCCAATGCAGCGACAGTTCAGAGCACTGTGTTTGGTCAGGTAGCAGCTGAAGCACTACCCAAGAGTCTTCATTGCCTAATCGTAAAACTTATGACTGATTGGCTAAAGAAGCCATCCCTGCAAGAACTCTCATATGAGAGGAAAAACTCCCTGCGGCTCGTGGACAATAATCTATATCATTTCTGCATATTTTCAGATAATGTACTGGCAACATCTGTAGTTGTTAACTCGAGTGTCTCCAGTGCGGACCATCCAAAGCAGTTGGTCTTTCACATTGTCACCGATGGAGTCAATTATGGAGCAATGCAAGCATGGTTCCTCAGTAATGACTTTAAAGGGGCCACCATAGAGGTGCAGGATATTGATGAGTTTCGTTGGTTGAATGCATCTTATTCTCCAATTGTCAAGCAGCTCCTCAATCCAGACTCACGAGCCTTCTATTTTGGGGCATATCAAGATGTTAATGTTCAACCGAAAATGCAGAATCCCAAGTATTTGTCTTTGCTGAATCATCTTCGGTTCTACATCCCTGAGATTTATCCGCAGCTTGAGAAGGTTGTTTTCCTGGACGATGATATTGTTGTCCAGAAGGACCTGACACCACTTTTCTCACTGGATTTGCACGGAAATGTGAATGGCGCTGTTGAAACCTGTCTTGAAGCGTTCCATCGGTACTACAAGTATCTAAACTTCTCAAATCCAATTATAAGCTCAAAGTTTGATCCACAGGCATGTGCATGGGCATTTGGTATGAACATTTTTGACTTGGTTGCATGGAGGAAGGCAAATGTGACCGGAAGATATCACTATTGGCAAGAGCAGAATGCCGATGGGACACTTTGGAAGCTGGGGACACTCCCTCCTGCTCTTCTATGCTTTTATGGTTTGACAGAGCCACTTGACAGAAGATGGCATGCTTTAGGATTGGGTTATGACCTCAATATTGACAACCGCCTGATCGAAAGTGCGGCAGTTGTCCACTTCAACGGGAACATGAAGCCGTGGCTGAAGTTAGCTATAGCCAGGTATAAGCCACTATGGGACAGATACATAAATCAAAGTCACCCTTATCTTCAAGATTGTGTCACAAGTTGA 1608 0.4372 MRRRAAEFRRPVRRRVSYWIWLFIALSSILGLFLFLLQNHHYHDPDDFPSLEKNARVEHFARESLNFTEEITSVKSFSRQLAEQMTLAKAYVVIAKEHNNLHLAWQLSKKIRGCQLLLSKTAMTGEPVTQEEAEPIIKSLSALIFKAQDIHYDIATTIVTMKSHIQALEERANAATVQSTVFGQVAAEALPKSLHCLIVKLMTDWLKKPSLQELSYERKNSLRLVDNNLYHFCIFSDNVLATSVVVNSSVSSADHPKQLVFHIVTDGVNYGAMQAWFLSNDFKGATIEVQDIDEFRWLNASYSPIVKQLLNPDSRAFYFGAYQDVNVQPKMQNPKYLSLLNHLRFYIPEIYPQLEKVVFLDDDIVVQKDLTPLFSLDLHGNVNGAVETCLEAFHRYYKYLNFSNPIISSKFDPQACAWAFGMNIFDLVAWRKANVTGRYHYWQEQNADGTLWKLGTLPPALLCFYGLTEPLDRRWHALGLGYDLNIDNRLIESAAVVHFNGNMKPWLKLAIARYKPLWDRYINQSHPYLQDCVTS* 536
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan1g1072 535 CDD GT8_like_1 230 523 - -
Lan1g1072 535 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 232 531 IPR029044 -
Lan1g1072 535 PANTHER GALACTURONOSYLTRANSFERASE 4-RELATED 3 535 IPR029993 GO:0047262
Lan1g1072 535 PANTHER HEXOSYLTRANSFERASE 3 535 - -
Lan1g1072 535 SUPERFAMILY Nucleotide-diphospho-sugar transferases 230 533 IPR029044 -
Lan1g1072 535 Pfam Glycosyl transferase family 8 234 509 IPR002495 GO:0016757
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan1g1072 Lan-Chr1 20874954 20878771 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan1g1072 1 532 Glycosyltransferase AT2G20810 54.562 0.0 588
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan1g1072 K13648 - gmx:100805886 942.954
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan1g1072 1 20874954 20878771 Lan1g1072 1 20874954 20878771 ECH
Lan1g1072 1 20874954 20878771 Lan1g0143 1 1067518 1071745 LSH