Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan1g0143 ATGCGGCGGCGGGCTGCCGAGTTTCGGCGCCCGGTTAGACGGAGGTTAACTTATTGGATCTGGTTGTTCCTTGCCTTGTTCTCTATTCTGGGTTTGTTCTTGTTCTTTCTCCAACATCATCATCATCACCAAGATCCCAATGATTATCCTTCTCTGGAGAGAAATGCAAAAGTTGAACATTTTGCTAGGGAGAGTTTGAACTTTACTGAAGAAATTACGAGTGCAAAATCATTTTCTCGGCAGTTAGCCGAACAAATGACTCTGGCAAAGGCTTATGTGGTCATTGCTAAAGAGCACAATAATCTTCATCTAGCCTGGCAGCTTAGTAAAAAGATAAGAGGATGCCAGCTTTTGCTTTCAAAAGCTGCCATGACTGGTGAGCCTGTCGCACAGGAGGAAGCTGAGCCAATCATTAAAAGCCTCTCTTCTCTCATTTTTAAGGCACAAGATATCCATTATGATATTGCGACTACAATAGTGACTATGAAATCACATGTTCAAGCTCTTGAAGAGCGTGCCAATGCAGCAACAATTCAAAGCACTGTGTTTGGTCAAGTAGCAGCTGAAGCACTGCCCAAGAGTCTTCATTACCTAAACATAAAACTTATGACTGATTGGCTTAAGAAACCATCCCTGCAAGAACTCTCAGATGAGACGAAAAACTCCCCGCGGCTCATGGACAATAATCTATATCATTTCTGCATATTTTCTGATAATGTACTGGCAACATCTGTAGTTGTTAACTCCACTGTGTCCAGCGCTGACCATCCAAAACAGTTGGTCTTCCACATTGTCACCAATGGAGTCAATTATGGAGCAATGCAAGCATGGTTTCTCAGTAATGACTTTAAAGGGGCCACGATAGAGGTACAGAATATTGACGAGTTTCATTGGTTGAATGCATCTTACTCTCCACTTGTCAAGCAGCTTCTCAATTCAGACTCACGATCCTTCTATTTTGGGGTATATCAAGATGTAAATGTTGAACCAAAAATGCGGAATCCCAAGCATTTGTCTTTATTGAATCATCTTCGGTTTTACATCCCTGAGATTTATCCACAACTTGAGAAGGTTATTTTCCTCGATGATGATCTTGTTGTCCAGAAGGACCTTACGCCTCTTTTCTCACTGGATTTGCATGGAAATGTGAATGGTGCAGTTGAAACCTGTCTTGAAGCGTTCCACCGGTACTACAAGTATCTCAACTTCTCAAATTCAATTATAAGCTCAAAGTTTGATCCGCAGGCATGTGCATGGGCATTTGGTATGAACATTTTTGACTTGGTTGCATGGAGGAAGGCAAACGTGACCACAAAATATCACTATTGGCAAGAGCAGAATGCTGATGGGACACTTTGGAAGCTGGGGACACTTCCTCCAGCTCTTCTATCTTTTTATGGTTTGACAGAGCCACTTGACAGAAGATGGCATGTATTAGGATTGGGTTATGACCTGAATATTGACAACCGCCTGATCGAAAGTGCAGCAGTTGTTCACTTCAACGGGAACATGAAGCCGTGGCTGAAATTAGCTATAGGCAGGTATAAGCCACTATGGGACAGATACATAAATCGAAGTCATCCTTATCTTCAAGATTGTGTCACAAGTTGA 1611 0.4227 MRRRAAEFRRPVRRRLTYWIWLFLALFSILGLFLFFLQHHHHHQDPNDYPSLERNAKVEHFARESLNFTEEITSAKSFSRQLAEQMTLAKAYVVIAKEHNNLHLAWQLSKKIRGCQLLLSKAAMTGEPVAQEEAEPIIKSLSSLIFKAQDIHYDIATTIVTMKSHVQALEERANAATIQSTVFGQVAAEALPKSLHYLNIKLMTDWLKKPSLQELSDETKNSPRLMDNNLYHFCIFSDNVLATSVVVNSTVSSADHPKQLVFHIVTNGVNYGAMQAWFLSNDFKGATIEVQNIDEFHWLNASYSPLVKQLLNSDSRSFYFGVYQDVNVEPKMRNPKHLSLLNHLRFYIPEIYPQLEKVIFLDDDLVVQKDLTPLFSLDLHGNVNGAVETCLEAFHRYYKYLNFSNSIISSKFDPQACAWAFGMNIFDLVAWRKANVTTKYHYWQEQNADGTLWKLGTLPPALLSFYGLTEPLDRRWHVLGLGYDLNIDNRLIESAAVVHFNGNMKPWLKLAIGRYKPLWDRYINRSHPYLQDCVTS* 537
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan1g0143 536 CDD GT8_like_1 231 524 - -
Lan1g0143 536 Pfam Glycosyl transferase family 8 235 510 IPR002495 GO:0016757
Lan1g0143 536 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 232 532 IPR029044 -
Lan1g0143 536 PANTHER GALACTURONOSYLTRANSFERASE 4-RELATED 3 536 IPR029993 GO:0047262
Lan1g0143 536 PANTHER HEXOSYLTRANSFERASE 3 536 - -
Lan1g0143 536 SUPERFAMILY Nucleotide-diphospho-sugar transferases 231 534 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan1g0143 Lan-Chr1 1067518 1071745 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan1g0143 1 533 Glycosyltransferase AT2G20810 53.903 0.0 582
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan1g0143 K13648 - gmx:100805886 953.74
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan1g1072 1 20874954 20878771 Lan1g0143 1 1067518 1071745 LSH