Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan1g1067 ATGTGGTGGGAAAAGGTAATAGTGAAGATAACTGGTGAAGATGGAAAGGGACCAGGGAAAAGGTGGGGCCACACATGTAACACCATTAAAGGTGGAAGATTTATCTATGTCTTTGGAGGTTATGGCGAAAATAACTCTCAAACCAACAAAGTTTACGTCTTTCGTACTCTGATCCAGAGTTGGAGCCAACCTGAGATGAAAGGGCACCCACCTATTCCTAGGGATAGCCATACATGTTCAACCATTGGTGATAATCTTTTTGTGTTTGGTGGCACAGATGGGGTTAATCCACTCAATGATTTGCATTTTCTAGATACTTCTTCGCATACATGGATTTCTCCATCCATAAGAGGAGACGGGCCAGCGGCTCGTGAGGGACATAGTGCAGCAGTTGTTGGTAAACGGCTATTCATCTTTGGTGGTTGCGGAAAATCTGCAGATAATGGTAGCGATGTCTACTATAATGATCTTTACATATTGAATACAGAGACATTTGTTTGGAGGTGTGCTACAACGTCAGGGACTCCGCCATCTCCTCGTGATAGCCATAGTTGCTCATCTTGGAAAAACAAAATTATCGTGGTAGGGGGTGAAGATGGACACGATTATTATTTATCTGATGTCCATATCCTTGATACTGATACACTAATTTGGAGGAAGCTGGCTACATCAGGCCAATTGATGCCACCTCGAGCTGGTCATTCTGCAGTTTGTTTCGGCAAGCACTTGTTTGTTTTTGGTGGATTTACAGATGCTCAAAATTTATATAATGACCTTTACATGCTTGATATTGATACTGGTGTTTGGACGAACATTACAACTACAACCAACAGTCCTTCTGCTAGATTTTCTGTAGCTGGTGACTCTGTAGACCCTATTAAGAGTGGTGTTCTTGTCTTCATCGGTGGTTGTAATAAAAGTCTCGAAGGCCTTGATGACATGTTTTACCTATATACAGGGATGACCAGAGAAAGTGGACAGAGGCAAGAGAAGTTATCTTTGAGGAAGCAGCTGAAGCTGAAATGCCAAGAACAGAATCTTAATCCTGCCCAAAATATGGTTAGATATAGAGTGGGAACTGATATTAGACCGCGTATTACAGTGTTGAACTGTAGCCAGCCAAGTGGACTAAATGTACCAGCAAGCCAACTCATGCCTCCTCCTGGAAAGAAAATGTTTGCAGCCAAGGTGACCAAAAACATCTCCGAGGGATATGCGATTGAAACTGTTATCGACGGAAAGCCTCTTCGGGGTATTTTGTTTCATAACAAGCCGATCTCTCTGCACCCATCTGATCTTACTCCCACTAGGAAAAGAGCTGCTGATGAAGATGGTAGTATCACCCCAAATGGTGCACACACCGACACGTCAAAATCTCCTAAAGTGTCTGAAATACAAAATAGACATGCAGTTCATGGAGACAGTTCAGAATCTCATTACCACCACCACACTGAAGCTCATGCTTCCATCAGTCACAAGATTTCTGCCGACCGAGAACCAGAAGCTGGTTCTTCGAGTCAAATTGATGTTGAAAAATATGAAACACCAAAATCCTCAGGTGGAAACTCGAATAATGATGGAGCAAATGATGTGGTAAATTCTGCAAGTGAAGTCCCAGCCAATGATCAGACAAATGTGCCAATTTCGAATACTGAAGTTCCAAGCCATGACATTAAAAATGATGCACCAAACTGCAACACTGGATTTCCTAAACCTGCCACAACTGAGAGTGCTGCATGTCCGTCAAATCAAGGTGCAACGATGGATTGCACAGCTTCAAGGACAGAAGAACGACTTGAACTCGACATATATCTGCTAATAGTAATTAAGATCCTGTCTGCTTGGGGTTTGTACATTCCTTGTCTTAAGGTGATCAGAGAAGTACATATAACTGGTTACCGACTAACATAG 1911 0.4254 MWWEKVIVKITGEDGKGPGKRWGHTCNTIKGGRFIYVFGGYGENNSQTNKVYVFRTLIQSWSQPEMKGHPPIPRDSHTCSTIGDNLFVFGGTDGVNPLNDLHFLDTSSHTWISPSIRGDGPAAREGHSAAVVGKRLFIFGGCGKSADNGSDVYYNDLYILNTETFVWRCATTSGTPPSPRDSHSCSSWKNKIIVVGGEDGHDYYLSDVHILDTDTLIWRKLATSGQLMPPRAGHSAVCFGKHLFVFGGFTDAQNLYNDLYMLDIDTGVWTNITTTTNSPSARFSVAGDSVDPIKSGVLVFIGGCNKSLEGLDDMFYLYTGMTRESGQRQEKLSLRKQLKLKCQEQNLNPAQNMVRYRVGTDIRPRITVLNCSQPSGLNVPASQLMPPPGKKMFAAKVTKNISEGYAIETVIDGKPLRGILFHNKPISLHPSDLTPTRKRAADEDGSITPNGAHTDTSKSPKVSEIQNRHAVHGDSSESHYHHHTEAHASISHKISADREPEAGSSSQIDVEKYETPKSSGGNSNNDGANDVVNSASEVPANDQTNVPISNTEVPSHDIKNDAPNCNTGFPKPATTESAACPSNQGATMDCTASRTEERLELDIYLLIVIKILSAWGLYIPCLKVIREVHITGYRLT* 637
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan1g1067 636 SMART kelc_smart 191 241 IPR006652 GO:0005515
Lan1g1067 636 SMART kelc_smart 85 134 IPR006652 GO:0005515
Lan1g1067 636 SMART kelc_smart 242 292 IPR006652 GO:0005515
Lan1g1067 636 SMART kelc_smart 34 84 IPR006652 GO:0005515
Lan1g1067 636 Gene3D - 3 150 IPR015915 GO:0005515
Lan1g1067 636 SUPERFAMILY Kelch motif 69 316 IPR015915 GO:0005515
Lan1g1067 636 MobiDBLite consensus disorder prediction 508 533 - -
Lan1g1067 636 Pfam Kelch motif 121 165 - -
Lan1g1067 636 MobiDBLite consensus disorder prediction 465 499 - -
Lan1g1067 636 Pfam Kelch motif 73 111 IPR006652 GO:0005515
Lan1g1067 636 Pfam Kelch motif 230 274 - -
Lan1g1067 636 MobiDBLite consensus disorder prediction 449 464 - -
Lan1g1067 636 Gene3D - 151 370 IPR015915 GO:0005515
Lan1g1067 636 PANTHER KELCH REPEAT DOMAIN 12 500 - -
Lan1g1067 636 MobiDBLite consensus disorder prediction 425 533 - -
Lan1g1067 636 PANTHER GALACTOSE OXIDASE/KELCH REPEAT SUPERFAMILY PROTEIN 12 500 - -
Lan1g1067 636 Pfam Galactose oxidase, central domain 21 54 - -
Lan1g1067 636 Pfam Galactose oxidase, central domain 179 224 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan1g1067 Lan-Chr1 20838430 20843565 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan1g1067 111 317 Acyl Lipid Metabolism Gene Families AT3G05420 32.258 1.91e-24 106
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan1g1067 - - gmx:100803752 823.542
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan1g1067 1 20838430 20843565 Lan1g1067 1 20838430 20843565 ECH
Lan1g1067 1 20838430 20843565 Lan1g0132 1 970793 976694 LSH