Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan1g0132 ATGAGGTGGGAAAAGTTAGAGATGAAGATGGAGAGTGAAGATGAAAAGGGGCCAGGGAAAAGGTGGGGCCACACATGTAACGCCGTTAAAGGTGGAAGGTTTGTGTATCTCTTTGGAGGTTATGGAAAACATAACTCTCAGACCAATCAAGTTCACGTCTTTGATACTCTCAATCAGACTTGGACCGAACCCGCGATCAAAGGCTCCCTGCCTACTCCTAGGGACAGCCATACCTGCACAGCCATTGGTGATAATCTATTTGTGTTTGGGGGTACAGATGGGGTTAATCTGCTGAAGGATTTGCACATACTAGACACTTCTTCACATACATGGATTTCTCCAAGCATAAGAGGAGATGGGCCAGAGGCACGTGAAGGTCATAGTGCAGCTGTTGTTGGTAAACGGCTATACATCTTTGGTGGTTGTGGAAAATCCGCAGATAATGATAATGAGGTCTACTACAATGATCTTTACATATTGAATACAGAGACATTTGTTTGGAAGTGTGCTACAACATCAGGCACTCCACCATCTCCTCGTGATAGCCATAGTTGCTCCTCTTGGAAAAACAAAATTATTGTGATAGGGGGTGAAGATGGACATGATTATTATTTATCTGACGTTCATATCCTTGATACTGATACACTAATTTGGAGGGAGCTGACTACATCGGGCCAATTGTTGCCACCTCGAGCTGGTCATTCTACAGTTTCTTTTGGAAAGAACTTGTTTGTTTTTGGTGGATTTACAGATGCCCAAAATTTATATAATGACCTTTACATGCTTGATATTGATACTGGTGTTTGGACAAATGTTACAACTACAACCAACAGTCCTTGTGCTAGATTTTCTGTAGCTGGTGACTGTGTAGACCCTATTAAAGGTGGTGCTCTTGTGTTCATCGGTGGTTGTAATAAAAGTCTTGAGGCCCTTGATGACATGTATTACCTATATACAGGGATGGCTAGAGAGAGTGGACAGAGGCCAGAGAAGTTGTCTTTGAGGAAGCAGCTGAAGCTGAAATGTCAAGAGCAGAATCTGAGTCCTGTTCAAAATGATGTTCTGGTGAGATATGGAGTGAGCGCTGATATGAGACCACTCATGACAGTGCTGAACTGTAGCCAACCAAGTGGATTAAATATCCCAGTAAATCAACCGCTGCCTCCTCCTGGAAAGAAAATGTTTGAAGCCAAGGTGACTAAAAACATCTCTGAGGGATATGCCATTGAAACTGTTATCGATGGAAAGCATCTTAGAGGAATTCTGTTTTTAAACAAGCCGAGCTCTCTGCCCCCATCTGCTCATACTTCCACCAGGAAAAGGACTGCTGAAATTGGCAGTATAATCCCAAATGGTGCACACACCAACATGTCAAAGACTCCTAAAGTGGATGAAATAAAAAATAGACATGCAGTTCATGGAGACAGTTCAGAATCTCATGAGCACCACCGTATTGAAGCTGTTGCTTCTCTTCTGTCCAGTAACCCAACAACTGCTGATGCTTCTGTCATTCATAAGGTTTCTGTTGACAGAGAACCAGAAGTTGCTTTTTTGAATCAAATTGATGGTGGAAAATATGAAACTCCTAAATCCTTGGGTGGAAACTTGAATCATGATGGTGCAAATGATGTGGCAAGTTCCACAGGTGATGTCAACACAAATGATCAGACAAAAGTGTCAATTTCGAAGCCTGAAGTTCCAAGGCATGACAATAGAAATGATGCACCAAACTGCAACACTGAATTTTTTAATCCTGTCACAACTGAGAGTGCTACTTGTCTATCAAATCAAGGTGTGATGATGGATTGCGCAACTGCAAGGACAGAAGAAAACAGTGAACCTGCAAAATGGACTTGA 1857 0.4227 MRWEKLEMKMESEDEKGPGKRWGHTCNAVKGGRFVYLFGGYGKHNSQTNQVHVFDTLNQTWTEPAIKGSLPTPRDSHTCTAIGDNLFVFGGTDGVNLLKDLHILDTSSHTWISPSIRGDGPEAREGHSAAVVGKRLYIFGGCGKSADNDNEVYYNDLYILNTETFVWKCATTSGTPPSPRDSHSCSSWKNKIIVIGGEDGHDYYLSDVHILDTDTLIWRELTTSGQLLPPRAGHSTVSFGKNLFVFGGFTDAQNLYNDLYMLDIDTGVWTNVTTTTNSPCARFSVAGDCVDPIKGGALVFIGGCNKSLEALDDMYYLYTGMARESGQRPEKLSLRKQLKLKCQEQNLSPVQNDVLVRYGVSADMRPLMTVLNCSQPSGLNIPVNQPLPPPGKKMFEAKVTKNISEGYAIETVIDGKHLRGILFLNKPSSLPPSAHTSTRKRTAEIGSIIPNGAHTNMSKTPKVDEIKNRHAVHGDSSESHEHHRIEAVASLLSSNPTTADASVIHKVSVDREPEVAFLNQIDGGKYETPKSLGGNLNHDGANDVASSTGDVNTNDQTKVSISKPEVPRHDNRNDAPNCNTEFFNPVTTESATCLSNQGVMMDCATARTEENSEPAKWT* 619
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan1g0132 618 Gene3D - 146 375 IPR015915 GO:0005515
Lan1g0132 618 MobiDBLite consensus disorder prediction 546 579 - -
Lan1g0132 618 SUPERFAMILY Kelch motif 71 318 IPR015915 GO:0005515
Lan1g0132 618 MobiDBLite consensus disorder prediction 1 20 - -
Lan1g0132 618 Gene3D - 1 145 IPR015915 GO:0005515
Lan1g0132 618 MobiDBLite consensus disorder prediction 546 561 - -
Lan1g0132 618 SMART kelc_smart 191 241 IPR006652 GO:0005515
Lan1g0132 618 SMART kelc_smart 242 288 IPR006652 GO:0005515
Lan1g0132 618 SMART kelc_smart 34 84 IPR006652 GO:0005515
Lan1g0132 618 SMART kelc_smart 85 134 IPR006652 GO:0005515
Lan1g0132 618 Pfam Galactose oxidase, central domain 33 82 - -
Lan1g0132 618 Pfam Galactose oxidase, central domain 230 279 - -
Lan1g0132 618 Pfam Galactose oxidase, central domain 179 224 - -
Lan1g0132 618 PANTHER GALACTOSE OXIDASE/KELCH REPEAT SUPERFAMILY PROTEIN 14 443 - -
Lan1g0132 618 Pfam Kelch motif 121 165 - -
Lan1g0132 618 PANTHER KELCH REPEAT DOMAIN 14 443 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan1g0132 Lan-Chr1 970793 976694 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan1g0132 48 307 Acyl Lipid Metabolism Gene Families AT3G05420 29.670 7.59e-28 117
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan1g0132 - - gmx:100820222 923.309
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan1g1067 1 20838430 20843565 Lan1g0132 1 970793 976694 LSH